Lactuca sativa (garden lettuce): 111884550
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Entry
111884550 CDS
T05352
Name
(RefSeq) pleiotropic drug resistance protein 3 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111884550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111884550
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
111884550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA
AAA_29
Rad17
RsgA_GTPase
AAA_16
AAA_22
AAA_18
AAA_25
AAA_23
AAA_28
ABC_trans_N
AAA_30
AAA_33
NACHT
AAA_14
TsaE
RNA_helicase
AAA_15
AAA_5
PduV-EutP
RuvB_N
ORC-CDC6-like
nSTAND3
AAA_19
AAA_17
ATPase_2
SRPRB
AAA_11
NPHP3_N
AAA_7
Spore_III_AA
Mg_chelatase
T2SSE
Motif
Other DBs
NCBI-GeneID:
111884550
NCBI-ProteinID:
XP_023736634
LinkDB
All DBs
Position
9:complement(156577977..156588493)
Genome browser
AA seq
1449 aa
AA seq
DB search
MAQLVGSEEIESLRIELSEIGRSLRSSFRRHTSSFRANSEISCANDHEQTDENLLKWAAI
DRLPTFERLRSSLFDEEDADGHDGRGKKVVDVTKLLPPERHMFIEKLIKHIENDNLQLLQ
KLRKRTDKVGVQLPSVEVRYKNLHVEAECEVVHGKPLPTLWNSLQSMLSDFVIIPGLKSK
RAKITILNDVTGVIKPGRMTLLLGPPGCGKTTLLKALSGNLNKSLKMSGEISYNGYKLDE
FVAQKTSAYISQNDLHIPEMTVRETLDFSARCQGTGSRAEIMMEVNRREKEGGIIPDPYI
DTFMKAISIDGQKTTLQTNYILKILGLDICADTMFGDAMRRGISGGQKKRLTTGEMIVGP
TKALFMDEISNGLDSSTTYQIISCLQQLAHITDASVLISLLQPSPEAFDLFDDVILMAEG
MIVYHGPRNNVLEYFEGFGFKCPERKGVADFLQEVVSRKDQAKFWCRDEQPYSYISIENL
STRFKECYLAKEVNEDISKPFTRLQSHENAISFDVYSLSKWALFRACMSREILLMKRNSF
IYIFKLVQLVIIAFITMTVFFRTRLKVDVLDANYYLGSLFYALIILLVDGFPELSMTVSR
LSVFYKQRDMYFYPAWAYAIPASILKLPLSILEAIVWTSLTYYVIGYSPEPGRFFRQMLL
LFGMHFTSISMFRFFASFFQTVVASTTAGSISILFLLSFGGFIIPHTAMPSWLKWGFWVS
PLSYGEIGLAVNEFLSPRWNKITSTNTTIGLQTLQSRGLDFDGYYFWISLGALFGFALLF
NIGFILSLSYLKAPGTRAIISKEKFFDVQKSKESKHHNHRDETTKTSNTHEITELHEGKM
VLPFEPLTITFQDLQYYVEPSPEMREHGFTGKRLQLLHDITGAFRPGVLTALMGVSGAGK
TTLLDVLAGRKTSGTVEGEIKIGGYPKVQETFARISGYCEQTDIHSPQITVEESVIFSAW
LRLHPEIDSKTKYKFIEEILETVELYAIKDALVGVPGVSGLSTEQRKRLTIAVEVVANPS
IIFMDEPTTGLDARSAAIVMRAVKNIVDTGRTIVCTIHQPSIDIFEAFDELILLKNGGRM
IYCGPLGRHSSSVIKYFESISSVPKIKDNYNPATWMLEVTSASVEAELGIDFAQIFSTSA
LYKSNRDLVNTLGKPPSGSKELYFPTRFPQNGWGQFKACLWKQHLSYWRSPSYNLMRSLH
MLFASFIFGLLFWDQGRKIHNQQSLFNVLGSMFSAVLFCGINNSSSVLPYISMERTVLYR
ERFSGMYASWAYALAQVTIEFPYLFAQSLAFVCITYPMIGYYWSAYKIFMYFYAFLCTLM
YFTYLGMLLVAMTPSFPVAAILQSAFYTIFNLFGGFLIPRPKIPNWWIWLYYLTPTSWSL
NAMLTSQFGDVKKEILVFGETKSVEDFLRDYFGFHHDQLPLAGVLLALYPIILASLFAYC
ISKLNFQRR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctcaattagttgggtccgaagagatagagtctctaagaattgagctttctgagatt
ggaagaagtttaagatcatcatttcgtcgtcatacatctagttttcgtgcaaactcagaa
ataagttgtgcaaacgatcatgaacagacagatgagaatcttctaaagtgggcagcaatt
gatagattgccaacatttgaacgtttgagatcatctttgtttgatgaagaagatgcagat
gggcatgatggtagaggaaagaaggtggttgatgtcacaaagcttcttcctcctgaacga
cacatgtttatcgagaagctcatcaaacacattgaaaatgacaacttacagttgttgcag
aaactcagaaaacgaacagacaaagttggtgttcaattgccctctgtggaggtgagatat
aagaatcttcatgtggaagctgagtgtgaagtggttcatgggaagccactaccaactctc
tggaattccttgcaaagtatgctttctgattttgtcatcatacctggtttaaagtctaaa
cgagcaaagataacgatcttaaacgatgtcactggtgtcattaagcctggaaggatgact
ctccttcttggtcctccaggatgtgggaaaaccactttgttgaaggcactttcagggaac
ctaaacaaatctctcaagatgagtggtgagatttcttacaatggatacaaactagatgaa
tttgtagctcagaaaacttctgcttatataagccaaaatgatttgcatatccctgagatg
acagtgagggaaacacttgatttctcagcccgttgtcagggtactggaagtcgtgcagaa
attatgatggaggttaataggagggagaaggaaggagggattattccagatccatatata
gacacttttatgaaggcaatttccattgatggacaaaagacaactcttcaaacaaactac
atcttgaagattcttggccttgatatatgtgctgatacaatgtttggagatgccatgagg
agaggaatctctggtggtcaaaagaaaaggttgactacaggggagatgattgtgggtccc
acaaaagctctttttatggatgaaatatcaaatggcttagacagttccactacgtatcag
ataatatcttgtcttcagcagttagcacatatcacagatgcttctgtactgatttcactt
cttcagccatcaccagaagcatttgatctctttgatgacgtcatattaatggcagaaggg
atgattgtgtatcatggacctcgcaataacgttctagagtattttgagggttttggtttt
aagtgccctgagagaaaaggtgtagctgacttcctccaagaggttgtctcaagaaaagat
caagcaaagttctggtgtcgagatgaacaaccatacagttatatctcaatagagaactta
tcaacgagatttaaggagtgttatttggcaaaagaagtaaatgaagatatttccaaaccc
ttcactagattacaaagccatgagaatgcaatttctttcgatgtttattctctttcaaaa
tgggctctgtttagagcttgcatgtctagggagattcttctcatgaaaaggaattctttt
atatatatcttcaaattagtccagcttgtcataatcgcgttcatcacaatgactgtattc
ttccgaactagattaaaggttgatgtccttgatgcgaattattaccttggatcactcttt
tatgcactcataatccttttagtggatgggttcccagaattgtctatgacagtttcacga
ctttcagttttctataaacaaagagatatgtacttctatcctgcttgggcttatgcaatt
cctgcatctattcttaaacttccattgtcaatcttggaagccattgtttggacaagtctc
acttattatgtcattggatatagtcctgaaccagggaggttctttcgccagatgttgctc
ttatttgggatgcacttcacgtcaatatccatgtttcgattttttgcatcgttctttcaa
actgtggttgcttccacaactgcaggaagtatatcaatactgtttttgttatcatttggt
ggcttcattataccacacactgcaatgccttcttggttaaagtggggattttgggtttct
ccactttcatatggtgaaattggacttgcagtgaatgaattcctttctccaagatggaac
aagataacgtctacaaacacaaccataggactacaaacacttcaaagtcgtggattagac
tttgatggatactatttttggatatcacttggtgccttgtttggtttcgctttgctattc
aacataggcttcatcttgtctttaagctacttgaaggcccctggtacgcgtgctataatt
tcaaaggaaaagttttttgatgtacaaaaaagtaaagaatccaaacaccacaatcatcga
gatgaaacaactaaaacttctaatactcatgagatcacagagcttcatgaaggaaaaatg
gtgttaccttttgaaccactaacaattacatttcaagatctgcaatactacgtcgagcct
tcacctgaaatgagagagcatggcttcactggaaagcgacttcaattacttcacgacatc
acaggagcttttagacctggtgttcttacagcattaatgggtgtaagtggtgctggaaaa
acgacacttcttgatgttcttgctggaaggaaaaccagtggaactgttgaaggagagatt
aagattggaggttatcctaaagtccaagagacttttgctaggatttcaggttattgtgag
caaactgatatacactctccccaaattacagttgaagaatcagtgatattttctgcttgg
cttcgtcttcatccagaaattgattcaaaaactaaatacaaattcatagaagaaatcctg
gaaacagttgagctttatgcaataaaagatgcgttggttggggttcctggtgttagtggt
ctatcaacagagcaacgtaagaggctgacaattgctgtagaagttgtagctaatccctcc
attattttcatggatgaacctaccactggacttgatgctagatcagctgccattgtcatg
cgagctgtgaagaatattgttgatacaggaagaacaatcgtctgtactattcatcaaccc
agcattgacatattcgaggcctttgatgagctaatcctcttgaagaatggtgggcgtatg
atatattgtgggccactgggtcgtcattcaagtagtgtcattaaatactttgagagcatt
tcttccgtgcccaagattaaagataactataatccagcaacttggatgttagaggtaact
tcagcatcagtggaagctgaacttggaattgattttgctcaaatattttctacttcggca
ttgtacaagagcaatagagaccttgtaaacacattaggtaaacccccttctggttcaaaa
gagttgtattttccaacacgcttcccacagaatggttggggtcagttcaaggcttgttta
tggaaacaacacttgtcatactggagaagtccatcatacaacttgatgcgttctctacat
atgctttttgcttcgtttattttcgggttactcttctgggaccaagggaggaaaatacat
aaccaacagagtttattcaatgtccttggttcgatgttctctgctgtacttttctgtggc
ataaacaactcctcttcagttctaccatatatttccatggagcgaactgttctgtatcgt
gaaaggttttctggaatgtatgcatcatgggcttatgctcttgcacaggtgacaatcgag
tttccctatctctttgcccaatcacttgcatttgtatgcatcacgtatcctatgattgga
tattattggtcagcctataagattttcatgtacttttatgcctttttgtgcacattgatg
tacttcacctatttgggaatgctacttgtagcaatgacaccaagctttcctgtagctgca
attctacagtctgcattctacacgatatttaacttgtttggtggatttttaattcctaga
ccgaaaattcccaattggtggatctggctgtattatttgactcctacctcatggtcgctt
aacgcaatgcttacttctcagtttggtgatgtgaagaaggagattctagtttttggagaa
actaaatctgtggaagacttcttaagagattactttggttttcatcatgatcagttacca
ctggcaggggttcttcttgcactatatcccatcattcttgcttctctatttgcatattgt
atatcaaaactgaacttccagagaaggtaa
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integrated database retrieval system
