Lactuca sativa (garden lettuce): 111884756
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Entry
111884756 CDS
T05352
Symbol
LOC111884756
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111884756 (LOC111884756)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111884756 (LOC111884756)
03032 DNA replication proteins [BR:
lsv03032
]
111884756 (LOC111884756)
Spliceosome [BR:
lsv03041
]
Complex A
U1 snRNP components
Sm proteins
111884756 (LOC111884756)
U2 snRNP components
111884756 (LOC111884756)
Complex B
U1 snRNP components
111884756 (LOC111884756)
U4/U6.U5 tri-snRNP components
111884756 (LOC111884756)
Complex C
U2 snRNP components
111884756 (LOC111884756)
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111884756 (LOC111884756)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
Gemin7
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
111884756
NCBI-ProteinID:
XP_023736839
LinkDB
All DBs
Position
7:206149302..206150868
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPVGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaagttgaacaacgaaactgtctcgatcgagctcaag
aatggaacagttgtacatggaaccataacaggtgttgatattagcatgaacacacacttg
aagacggtgaagttgacactgaaagggaaaaatccagtaacccttgaccatttgagtgtt
agaggcaataacattcgttactatatacttcccgacagcttgaatctggagacattgcta
gtggaagagacacctagagtcaagcccaagaagcccactgcagggcggcctgtgggacgt
ggaagagggcggggccgcgggcgtggacgtggtcgtgggcgttaa
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