Lactuca sativa (garden lettuce): 111884899
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Entry
111884899 CDS
T05352
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111884899
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
111884899
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
UvsY
DUF5816
Motif
Other DBs
NCBI-GeneID:
111884899
NCBI-ProteinID:
XP_023736961
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Position
4:complement(78589073..78592450)
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AA seq
583 aa
AA seq
DB search
MGSCKNCKSKNLNVDTVTGNLECSSCGVVQDFDNYEQQTFNADGIIGTNVRLGTSGSRYD
YSYRETKIYLAQKVVSDILYKLDLENRVDEVNNMIKIITEEEYGSGNWFNVLVGACIYVV
MRKANKWLPLTSVCETVGCDNYELGRMVYRVIDHLDLKLPDFDIVGLFDRVMKELLGGKG
NIGKDKIGRMVKQGIFLIQCMIKWYVTTGRRPVPVVVAVIVFVCQLNDVVDVDFEDLASQ
LNVVVATCKLRYNELLKKLVEVARIRLPWGNDVNVKNIMKNAPIVIQYMEMKSMSNPTNK
TKNLEEVGADLDCLVSDCLNKDGRYFVQDFEFDDNKNNNDKSRGSIDWEVEDLEKLNISP
ECLSTIYLKYLNEYSEMKSSMATLENRNEKRSERYDFLMDGADYWSGNSELSKKLFLDKI
LEKDVGLNAMPKSFIDGCLKIQKRKKKIKAAKIRIEKIRRPPIEENGLDESGQSGQSQQF
VKIPVNSRKRKRKVKKVDIDWEDFVIETLLLHEVKEEEIEKGYYNTLLDLHVFNSGTTHV
SGTLGAFLSFQPYNGLKTTSPSFFSQSVLPVLLFYSISFARED
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttgcaagaattgcaaatcgaaaaacctaaatgtagacactgtcaccgggaat
cttgaatgctcttcatgcggcgtcgtccaagacttcgacaactatgaacaacaaaccttc
aacgccgacggaataatcggcaccaacgtccgattaggcacttctggatcccggtatgat
tactcttatcgtgaaaccaagatctacttagctcaaaaagtcgtctcagatatattatac
aaacttgatttagaaaatcgtgtcgatgaggttaacaacatgataaagatcataaccgaa
gaagaatacggttcaggaaattggttcaatgtcctcgtcggcgcctgtatatacgtcgtg
atgcgaaaagcaaacaagtggttacctttaacgagcgtatgcgaaaccgttggttgcgat
aactatgagttaggtcgaatggtatatcgcgttatcgatcaccttgatttgaaattgccg
gactttgatatagtggggttgttcgatcgagtgatgaaagagcttcttggggggaagggt
aacatcgggaaggataaaattggaagaatggtgaaacaagggattttcttgattcaatgt
atgattaagtggtatgtgacaacagggaggagaccggtgcctgtagtggtggctgtgatt
gttttcgtttgtcaacttaatgatgttgtcgatgttgattttgaagatttagcttctcaa
ttgaacgtggtggttgcaacctgcaagttaaggtacaatgaattgttgaagaagttagtg
gaggttgcaagaattcgtcttccatgggggaatgatgttaatgtcaagaacatcatgaag
aacgcccctatagttattcaatacatggagatgaaatcaatgtctaatcccacaaacaaa
accaagaatttggaggaagtaggtgcagatttggattgtttagtcagtgattgtttgaat
aaagatggacgatattttgttcaagattttgagtttgatgataataaaaataataatgat
aaatcacggggttcaatcgattgggaagttgaagatttggagaagcttaacatttcaccc
gaatgtttatccactatttacttgaaatacttgaatgaatattctgaaatgaagtcatca
atggcgacactagagaataggaatgaaaaaagaagtgaaagatatgattttttaatggat
ggggctgactattggagtgggaattctgaattaagcaagaagctttttcttgataaaata
ttggaaaaagatgttggtttgaatgctatgcctaaatctttcattgatggatgtttgaaa
atacaaaaaagaaaaaagaagatcaaggctgctaagataagaattgagaagataaggcgt
ccaccaatcgaagaaaatggtttagatgaaagtggtcaaagtggtcaaagtcaacaattt
gtaaaaattcctgtgaattcaagaaagagaaaacgaaaggtgaagaaagttgatattgat
tgggaagattttgttattgaaacattgttgcttcatgaagtgaaggaagaggaaatagag
aaagggtattataatactttgttggatcttcatgtcttcaactctggaactactcacgtg
agtggcacgctgggggcatttttgtcctttcaaccctacaacggacttaaaactacttct
ccttccttcttttctcaatcggtgcttccagttctcctcttctactccatttcttttgct
cgtgaagattga
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