Lactuca sativa (garden lettuce): 111884937
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Entry
111884937 CDS
T05352
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111884937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111884937
03032 DNA replication proteins [BR:
lsv03032
]
111884937
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
111884937
Prokaryotic type
111884937
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
111884937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
111884937
NCBI-ProteinID:
XP_023737003
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All DBs
Position
4:complement(374657153..374659320)
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AA seq
564 aa
AA seq
DB search
MSELELNRSEKKKKKSKSKDQDTINKNSDDATDAVDYLIKPQSFTPSIDTSEWPILLKNY
DRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTG
HSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDVPDVAKVARALETLTGA
VFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFWISCEAGTYVRTLCVHLGLILGV
GGHMQELRRVRSGIMGEKDNMITMHDVMDAQWSYDNYRDETYLRRVIMPLEVLLTSYKRL
VVKDSAVNAICYGAKLMIPGLLRFENDIENGEEVVLMTTKGEAIALGIAEMTTAVMATCD
HGVVAKIKRVVMDRDTYPRKWGLGPTASMKKKLITEGKLSKHGKANEKTPAEWLRNVVLP
TGGDSVVASLAAAPVQEETVEASDLKVVDSEKKKKKKKEKGVEDEGQKRKLEEVDVTDPD
TPVASKKQKVEEGESTKKKKKKDKKDKEGDEVVSEEDKSEKKKKKKKKDKENGDDASVTV
SDDEASKSSKKKEKKKKKKDAEEE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactcgagcttaatcgttcagagaagaagaaaaagaagagcaaatccaaagac
caagatacgatcaacaaaaattccgacgatgccactgacgctgtcgattatctcattaaa
ccacagagcttcactccatcgattgacacctccgaatggccgattctcctcaagaactat
gaccgccttaacgttcgaacaggacactatacgccacttccctctggctactctcctctc
aaacgccccctcgctgagtacatcaggtatggtgttatcaacctcgataaacctgctaac
cctagctcgcacgaggttgtagcttggatcaaacggatcctccgagtcgaaaaaaccggc
cacagcggtacactcgacccaaaagtcaccgggaacttaatcgtttgcatcgatagagcc
actcgccttgttaaatcacaacaaggtgccggaaaagagtacgtatgtgttgctcgactt
cattccgatgtgcctgatgtcgcgaaagtggctcgcgcattggagacgttaaccggtgca
gttttccaacgtccgccattgatttcagctgttaaaagacagctcaggattagaaccatt
tacgaaagcaaactcctggagtatgatgccgataagcatttggtcgtgttctggatctcg
tgtgaagctggtacgtatgtgagaacactctgtgttcatttaggtttgattttgggcgtt
ggtggacatatgcaggaactgagaagagtcagatctggtatcatgggggagaaagataac
atgataactatgcatgatgtcatggatgcacaatggagttacgacaattacagagacgaa
acttatctccgccgtgtgatcatgccattagaggtcttgttaaccagctacaaacgatta
gtcgtgaaggactctgctgtgaatgcaatctgttatggtgctaaactgatgattccaggt
ttgttaagattcgaaaacgacattgaaaatggcgaagaagtggtgttgatgactacaaaa
ggggaagcgattgctcttgggattgcagagatgactactgctgtaatggctacttgtgat
catggagttgtggcgaagatcaagagggtggtgatggatagagatacttatcctaggaaa
tgggggttagggcctactgcttcaatgaagaagaaactgattaccgaagggaaactaagc
aaacatggaaaagcaaatgagaaaactccggctgagtggctgaggaatgttgtgttgcct
actggtggtgattcggtggttgctagtcttgcagctgcacctgtgcaagaagaaactgta
gaagcttcagatctgaaagttgttgacagtgagaagaaaaagaagaagaaaaaggaaaag
ggtgttgaagatgaaggacaaaagaggaaattggaagaggttgatgttacagatccagat
acaccagtagcttccaagaaacagaaggttgaagaaggtgagagtactaagaagaagaag
aagaaggataagaaggataaggagggagatgaagttgtatcagaggaggataaatccgag
aagaagaagaagaagaaaaagaaggataaagaaaatggtgatgatgcctctgttactgtt
agtgatgatgaagcaagcaaaagctcaaagaagaaggagaagaagaagaagaagaaagat
gctgaagaagagtga
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