Lactuca sativa (garden lettuce): 111884988
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Entry
111884988 CDS
T05352
Name
(RefSeq) proteasome subunit alpha type-1-B
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
111884988
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsv01002
]
111884988
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsv03051
]
111884988
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111884988
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
111884988
Peptidases and inhibitors [BR:
lsv01002
]
Threonine peptidases
Family T1: proteasome family
111884988
Proteasome [BR:
lsv03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
111884988
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111884988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
111884988
NCBI-ProteinID:
XP_023737057
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Position
4:224538970..224540898
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AA seq
271 aa
AA seq
DB search
MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYGYTYESPLPVGRLVVQLADKAQVCT
QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFEKFT
GSTRDDLIKDALFAIRETLQGEKLTSSVCTVAVVGVGEAFSILDQATVQGLINEFEISGE
EAGGAAAEEAGGGGADQGGAAVEQEAAPMDI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaaaccagtacgacaccgacgtcacaacatggtcgccggcggggcggttgttt
caggtcgagtacgccatggaggctgtaaagcaaggatccgcggccattggtctccgatcc
aagacgcatgttgttctcgcctgcgtcaataaagctaattcggaactttcatcgcatcag
aagaagatcttcaaggtcgacgaccatatcggcgtcgccatcgctggtctcaccgctgac
ggccgtgttctgtcccgttacatgagatccgagtgtatcaattacggttatacctacgag
tctcctcttcctgttggccgtttagttgttcagctcgccgacaaagctcaggtgtgcact
caaaggtcatggaaacgcccatacggtgttggtctactagtggcggggttggatgaatcc
ggggcccacctgtactacaactgccctagcggcaattactttgaataccaagcttttgcc
atcgggtcccgctcacaagctgcaaagacttacttggaacgcaagtttgaaaagttcacg
gggtccacacgtgatgacctcatcaaggatgcgctttttgccattagagagactttgcaa
ggtgaaaaactcaccagcagtgtgtgcacagtggcggtggttggtgtaggggaagctttt
agtattttggatcaggcgactgtacaggggttgattaatgagtttgagatttccggtgaa
gaggctggtggtgctgctgcggaggaggctggtggtggtggtgctgatcagggaggagct
gcggtggagcaagaggctgctccgatggatatttga
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