Lactuca sativa (garden lettuce): 111885312
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Entry
111885312 CDS
T05352
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsv03036
]
111885312
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
111885312
Condensin II
111885312
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Laminin_II
PUMA_CC
TPR_MLP1_2
CCDC93_CC
BRE1
DUF4239
ABC_tran
PQQ_syn_pqqF_N_2
Motif
Other DBs
NCBI-GeneID:
111885312
NCBI-ProteinID:
XP_052625400
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All DBs
Position
3:complement(170956783..170966906)
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AA seq
1249 aa
AA seq
DB search
MGKVMDSDREFMSTDPKSTPGKKPPSTPRLFIKEMVMQNFKSYAGAQRVGPFHKSFTAVV
GPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLNSARVSVHFQEIIDLED
ETYEAVPGSDFVIAREAFRDNSSKYYINGRDSKFTEVTKKLKGKGVDLDNNRFLILQGEV
EQISLMKPKAQGPHDEGFLEYLEDIIGTNKYLEKIEESHKQLEALNEKRSGVVQMVKLAD
KERENLESVKNEAEDYMLKELSLLKWQERGVKFASEENATKMEEIQKNTSELQQNITSER
EKIQESKNSLKELETQHNKFLKRQEELDTELKRCKDEFKEFERQDVKHREDLKHVKTKIK
KTEEKVEKDSAKITDITRQSEESTNLIPKLEEDIPKLQKSLVNEEKILEEIMESSKVETE
KFREEVAKVRAELKPWEKELIEHQGKLEVASTEKKLLSEKHEAGRVAYLDAQKQLDDIQK
KVETKTSSIKDMQTKLEENKLDSSKAHKVEQECLKEQEALMTLEQTARQKVMELKSVMET
ERNQGSVLKAILQAKSSNSIEGIYGRMGDLGAIDAKYDVAVSTACAGLDYIVVETTAAAQ
ACVDMLRKNNLGVATFMILEKQGNHMSRMKEKVSTPEGVPRLFDLIKVQDERMKLAFYAA
MGNTVVAKDIDQATRIAYGGNQEFRRVVTLDGALFEKSGTMSGGGNKPRGGKMGTSIRAT
SVSGESFTEAENELNQISEKLKNIRQQISQVVREYKDLEKQATRLEMELAKSQKEIESLN
SQHEYLANQLDSLKNAAEPSKAEIARLEELKKVISEEEKEINRLTKGSKQLKEKVLELQG
KIENAGGEKLKNQKSKVNKIQNDIDKNSTEINRHKVQIETGNKLLKKLRNGIKESEKEIE
KLNAQKENLLTSFKEIEEKAFKVQDDYKKTEELIEQHKDSLGKAKSDYENLKKTVDELRA
SEVDADFKLQDMKKMIKELEMKEKGYKKKLEELHNSLSKHIEQIKKDLVDPEKLQATLGE
NESFAKASDLKKALEMVALLEAQMKEMNPNLDSIAEYRNKVSVYNERVEELNLVTNERDE
TKKQYDEWRKKRLDEFMEGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVR
PPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKD
RTKDAQFVIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVHGKD
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagtgatggatagcgaccgtgagttcatgtctacagatcccaagtcaactccg
gggaaaaaaccgccatcaactccacggcttttcatcaaagagatggttatgcagaatttc
aaatcttacgccggcgcacaacgagttgggccctttcataagagctttaccgctgtagtt
ggtcctaatggtagtgggaagagtaacgtgattgatgctatgttgttcgtatttggcaag
cgagctaagcagatgcgtcttaacaaagtgtcggagcttattcacaattcaaccaaccac
caaaatctcaacagtgcacgtgtatctgttcactttcaagaaatcattgatttggaagat
gaaacatatgaagctgttccaggaagtgattttgttatagctcgtgaagcttttcgagac
aactcttctaagtattatatcaatggacgtgacagtaagtttacagaagttaccaagaaa
ctaaaagggaaaggagttgacttggacaacaatcgatttctgattcttcagggtgaggtt
gagcaaatttcacttatgaaaccaaaagctcaaggtccacatgatgaagggtttcttgaa
tatctagaagatatcattggaaccaacaaatacttggaaaaaattgaagagtctcataaa
cagcttgaagctttgaatgaaaagaggtctggagtagtgcagatggttaagttagctgat
aaagaaagagaaaatctagagagtgtgaaaaatgaagcggaagattacatgcttaaggag
ttatctttattgaagtggcaagaaagaggagtaaagtttgcttctgaggagaatgctaca
aaaatggaagaaattcaaaagaacacatccgagcttcaacaaaatataacatctgaaagg
gagaagattcaggaaagcaaaaactctttgaaggagcttgagacacagcataacaagttt
ttaaagagacaagaggaacttgacactgagcttaaaaggtgcaaagatgaattcaaggaa
tttgagagacaagatgtgaaacatcgagaagatttaaaacatgtgaaaacaaagatcaag
aaaacagaagaaaaagttgaaaaggattcagcaaagattacagatatcacaaggcaatct
gaagagtcaactaatctaatccctaaactagaggaagatattcctaaactgcaaaagagt
ttggtgaatgaagaaaagatattggaggaaattatggaaagctctaaagttgaaactgag
aaattcagagaagaagttgcaaaggttcgtgctgaactaaagccttgggaaaaagaactg
attgagcatcaaggaaagcttgaagtggcatctacagaaaagaaacttttgtctgagaag
catgaagctggacgtgtggcatatttggatgctcaaaaacaattggatgatatacaaaag
aaagttgaaacaaagacttcaagcataaaagatatgcaaaccaagttagaagaaaacaaa
cttgattcatcaaaagcccataaagtagaacaagaatgtctaaaagaacaagaggctcta
atgactcttgaacaaacagcaagacaaaaagtcatggagctaaaatctgtcatggaaact
gaaaggaatcaagggtctgttttaaaagcaatattgcaagcaaaatcttcgaattcaatc
gagggtatttatggaagaatgggtgatttgggtgctattgatgcaaagtatgacgtggca
gtttcaacagcatgtgctggacttgattatattgtggtggaaacaacagctgcagcacaa
gcatgtgtggacatgcttcgtaagaacaatcttggtgttgctactttcatgatattggaa
aaacaagggaatcatatgtctagaatgaaggaaaaagtaagcacccctgagggcgttcca
cgtctttttgatctcatcaaggtgcaagatgaaagaatgaaacttgctttttatgcagca
atgggtaacactgttgttgccaaggatattgatcaggcaacacgaattgcatacggaggg
aatcaagaattccggcgagtagtgacactggatggagctttgtttgagaaatcagggaca
atgagtggaggtggaaacaagccacgcgggggtaaaatgggaacttccatcagagccacc
agtgtctctggtgaatcctttactgaagctgaaaatgaactcaatcaaatatcagaaaaa
ttaaaaaacataagacaacaaatctctcaagttgtcagagaatacaaggatttggaaaaa
caagccacacgtttagaaatggagttagccaaaagccaaaaagagattgagagtttgaat
tcacaacatgaatatcttgcaaatcaacttgattccctaaagaatgcagccgaaccaagt
aaggctgaaattgctagacttgaagaactcaagaaagttatttcagaagaagaaaaagag
atcaataggttgactaaaggctcaaaacagttgaaggagaaggtgttggagcttcaaggc
aaaatagagaatgcagggggtgaaaagttgaaaaatcagaagtcaaaggttaacaagatc
caaaatgacattgataaaaacagcacagagatcaatcgacacaaagttcaaatagaaact
gggaacaagcttttgaaaaaattaagaaatgggattaaagaatcagagaaagagatagaa
aaactgaatgcacaaaaggaaaatttattgacttcttttaaagagattgaagaaaaagca
ttcaaggttcaagatgattataagaagacagaagagcttattgaacaacacaaggattca
cttggaaaagcaaaatctgattatgaaaacttgaaaaagactgttgatgagttgagggca
tctgaggtggatgctgattttaaattacaagacatgaaaaaaatgataaaagaattggaa
atgaaagaaaaaggatacaagaaaaagctcgaggagttacacaactctctttcaaagcat
atagaacaaattaaaaaagatttagtcgatccagaaaagcttcaagccacacttggagaa
aacgaatcatttgctaaagcctctgaccttaaaaaggctttagaaatggtggcgttactt
gaagcacaaatgaaagagatgaaccctaatcttgattccattgctgaatatcgtaacaaa
gtatctgtatacaatgagcgagtcgaagagcttaatttagtaacaaacgaacgcgatgaa
acaaaaaaacaatacgatgaatggcgaaagaaaaggttagatgagttcatggaagggttc
aacactatttcacttaaactaaaggaaatgtatcagatgattactcttggaggtgatgca
gagcttgaattagtggattctttagatcctttttccgaaggtgttgtgtttagtgttaga
cctccgaaaaaaagttggaaaaatatcgctaatttatcagggggcgaaaagactttgagt
tcactagctcttgtgtttgcactacatcattacaagccaacacctctctatgttatggat
gaaatcgatgctgcgttagattttaagaatgtttcaattgtggggcattacgtgaaggat
cgaaccaaggatgcacaatttgttatcataagtttgagaaataacatgtttgagttggct
gatcgacttgtggggatttacaaaactgataattgcacaaagagcataacgataaatcca
gggagttttgtggttcatggaaaggattaa
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integrated database retrieval system
