Lactuca sativa (garden lettuce): 111885382
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Entry
111885382 CDS
T05352
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111885382
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111885382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
111885382
NCBI-ProteinID:
XP_023737417
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Position
9:complement(81001166..81003737)
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AA seq
329 aa
AA seq
DB search
MEKELIELFDSAKKAADAAAVGGGGGGAESSPEEDRCLDALKVLKKFPVNYQILVSTQVG
KRLRQLTKHPRKKIQSLASELVETWKGIIVKETLKNNNNNSDTKESPKSEHGSKISEKKT
QRTNSVKLPKTEDAKVEKNINKTNNSGPPKMNSLVYCKDPIRDKIRELLAEALCKVSTEA
DEDSKNEINGCDPYRVAVLVESAMFEKWGKSNGSHKFKYRSIMFNVKDPKNPDFRRKILL
GHVKPERILELTPEEMASTERQMENVKIKEKAMFDCERGGPPKATTDQFRCGRCGKRKCT
YYQLQTRSADEPMTTFVTCVNCDNHWKFC
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagctaattgaactgttcgattcggcgaaaaaagcagcggacgccgcggct
gttggaggcggaggcggaggcgcggaatcttcgccggaggaagatcgatgtctcgacgct
ttgaaagtgcttaagaaatttcctgttaactatcaaatccttgtttctactcaggtaggg
aaacgtcttcgtcaattaacaaaacacccaagaaaaaagatccaatcactagcgtctgaa
ctagtcgagacctggaaaggcataatagttaaagaaacattaaagaacaacaacaacaac
tcagacaccaaagaatctccaaaatcagaacatgggtcgaaaatatccgaaaagaaaact
caaaggaccaattccgtcaaacttccaaagacagaggatgcgaaggtcgaaaaaaacata
aacaaaacgaacaattctggtcccccaaagatgaattctctcgtctactgcaaagatccc
atccgcgataaaatccgtgaacttttagccgaagcattatgcaaagtttccacagaagct
gatgaggattcaaagaatgaaatcaatggttgtgatccatatcgggtggctgtattggtt
gagtcagcaatgtttgaaaaatgggggaaatcaaacggatcccacaagtttaaataccga
tcgataatgttcaatgtaaaagatccgaaaaatccggatttcagaaggaaaatattgttg
ggacatgtgaagccggagagaattttggagttgactcctgaagaaatggcgagtacagaa
agacaaatggagaatgtgaagataaaagaaaaggcgatgtttgactgtgaacgtgggggc
ccaccgaaggcgactacggatcagtttaggtgtggaaggtgtgggaaacggaagtgtacg
tattatcagttgcagacacgaagtgcggatgagccgatgacgacttttgtcacgtgtgtg
aattgtgataatcattggaagttttgttga
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