Lactuca sativa (garden lettuce): 111885446
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Entry
111885446 CDS
T05352
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsv01001
]
111885446
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111885446
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111885446
Protein kinases [BR:
lsv01001
]
Serine/threonine kinases: Other
Other
111885446
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111885446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_Prp19
LisH
WD40_WDHD1_1st
WD40_CDC20-Fz
LisH_PAC1
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
111885446
NCBI-ProteinID:
XP_023737468
LinkDB
All DBs
Position
5:156112724..156121868
Genome browser
AA seq
1848 aa
AA seq
DB search
MEAAADDFQTEGAAAPPPPPPPEPIPPVEEDDEDEEYEEEEEEEEDDEEETNNEDEILIA
KAQGLIDKITASPDNPKPICLHALASILETQEARYMEETGHSSLNNGRASYNIGRLGNLL
RDNDEFFELISVKFLSETRYPISVQAAALRLLFSCSLTWMYPHVFEETVLEHIKQWVMDG
STRSSSEDHKGKNGSSVKQSSDSEMLKTYSTGLLAVCLAGGGQVVEDVLTSGLSAKLMRY
LRIRVLGEASTSQKESNFLLDNKNSSAAAIRSRRHASETSLEPSRIPEEGITDDRWTEPD
GLEEDNETHDGKTRVNDRSNPGKNRGLLRSRGKGRVNEGGVENEHALNSPGSGIRLGGQG
QGQGQGRNFRDKSLVKSVELKRVADSKKLSGRVGGDLMIVERDDSDDCFQDCKVGSKDIF
EIVKMAVRAAEAEARTANASLEAIKAAGDAAAELVKTAALEEFKKSNNEDAAVLSASQAA
STVVDAANATEVCRNHNTGVSESANSKDPEPETNEETEEFFIPDAESLAKLREKFCIQCL
EILGEYIEVLGPVLHEKGVDVCLALLQRNSDLKEPSQIAVLLPDVLKLICALAAHRKFAA
LFVDRGGIQKLLALPRTPLTFSGLSSCLFAIGSLQGIMERVCALPSEVIHQLISLALQLQ
ECPQDQARKNSALFFASAFVFRAVIDAFDNQDGLQKLLNLLGEAASVRSGATSASVGPSA
TNPLRTPPEVLTSSEKQIAYHTTVALRQYFRAHLLLQVDSIRPNKNLKSAPRNIPSSRAA
YKPLDISNEAIDAVFRQIQKDRKLGPAFVRANWPAVEKFVNCNGHTTMLELCQAPPVERY
LHDLLQYALGILHIVTLVPNSRRMVVNATLSNDRLGIAVILDAANGAGFVDPEIIQPALN
VLVNLVCPPPSISMKPTMPGGQGQMSSTQPSSSNPPSTSEPAVNLNGESTGGQATPGACS
GLVGDRRISLGAKQGGPSSGLAAQMEQGYRQAREVVRANNGIKVLLQLLQPRIITPSTAL
DCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQMPSGEQGRWQTELSQVA
IELMAIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGL
STTAAQLLKEAQLTPLQSLAAPSSLAYQTSGQETASLQIQWPSGRSSSGFLTKEKSKPQD
DLNHSSFSSKRRPLVLLSPTTAKTTNSSKKPPIPPTSEPPATSEVDNSDCILKTPIILPL
KRKLTELRDFGPSSSSKRLNTSDLGFRSPVGPTPTTNRKNTLLGDTPFSSRTPGTVVSDN
LDDNNAHSHGIADTQANPERLTLDSIVVNYLKHQHRQCPAPITTLPPLSLLHPHVCPESK
RSLDAPSNITARLNTREFRNMYGGIHGSRRDRQFVYSRFRPWRTCRDDTGVLLTCITFLG
DSSQIAAGSHSGELKVFDSNTNNMLESSPGHQFPLTMVKSFISGDTQLLLSSSSHDVRLW
DAPSVSAGPKYSFDGIKAATFSHCGTMFAALSSELSRREILLYDVQTCKSDLKLTDPSSN
ASSKGHAYSQVHFSPSDIMLLWNGVLWDRRVPGPVHRFDQFTDYGGGGFHPAGNEVIINS
EVWDLRNFRLLRSVPSLDQTVITFNASGDVIYAILRRNLEEVTSAFQTRRVKHPLFSAFR
TIDAVNYSDVATCPVDRCVLDFATEPTDSFVGLVTMDDQDEMYSSARVYEIGRRKPTDDD
SDPDDAESEEEDEDDDDEDIDDDALLANDEDGDMSNDEDSLSDLDDDEDGDDDDDDDDDG
DFVMDGVDFGGGGIFEILSEDGEEGDDEDDDEMIESLSSGDEDFIGGF
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgctgcagacgattttcaaacggaaggagctgcggcgccaccgccaccgcca
ccacctgaaccgattcccccggtggaagaggatgacgaagacgaggaatatgaagaggaa
gaagaggaggaggaggatgacgaagaagaaacgaataacgaagacgaaattctgatagcg
aaagctcagggactgatagacaagatcaccgcctctcctgataaccctaagcccatatgt
cttcatgccctagcctccattctcgaaacccaagaagccaggtacatggaggaaactggg
cattcctctttaaacaatggtcgtgcttcctataacatcgggcgtttgggaaacttactc
agggataatgatgaattctttgaattgatatctgtaaagtttctatccgaaactcgatat
ccaatatctgttcaggcagctgctctaagacttctcttcagttgctcactcacttggatg
tatccacatgtttttgaagaaaccgttttggagcacataaaacaatgggtcatggatggg
tcaacaaggtcttcttctgaagatcacaagggcaaaaacgggtctagtgtaaaacaatca
tccgattctgaaatgttaaaaacctattctactggacttcttgctgtatgcttagctggt
ggaggtcaagttgtggaagatgttctcacatccggattatccgccaaacttatgcggtat
cttcgcatacgcgtattaggggaggcaagtacaagtcaaaaggagtcaaactttttatta
gacaacaaaaattcttcagctgctgctattagatcaaggaggcatgcttccgagacatct
ctagaaccttctagaatcccagaggagggaatcacagacgacaggtggacagaaccagat
ggtttagaagaagataacgaaactcatgatgggaagacaagggtaaatgaccgaagtaac
cctggaaagaatcgaggattgttaaggtctagagggaaaggcagagtgaatgaaggtggt
gtggagaatgaacatgctcttaattctccagggtctggaattagattagggggacaagga
caggggcaggggcaaggaaggaattttagggacaaaagtttggtaaagagtgtggagtta
aaacgtgtggctgattctaaaaagttgtctggaagggtaggtggtgatcttatgattgtt
gaaagagatgatagtgatgactgttttcaagattgtaaagttggatcaaaggatattttt
gagattgttaaaatggctgtaagagctgctgaagctgaagctagaacagcaaatgcttct
ctggaagccattaaagctgctggtgatgctgctgctgaacttgttaaaactgcagctttg
gaggagtttaaaaagtcaaacaatgaagatgctgcagttctatctgcatcgcaagctgcc
tctacagttgtggatgcagctaacgctactgaagtttgtaggaaccataacacaggtgtg
agtgagtcagctaattcaaaagatccagaacctgaaaccaatgaggaaactgaagagttt
ttcattcctgatgctgaatccttagcaaaactaagggaaaaattctgtattcagtgtctt
gaaattttaggagaatatattgaggttcttggccctgtgttacatgaaaaaggagtagat
gtttgtcttgcattgttgcaaagaaattctgatcttaaagagccatcacagattgcagtt
cttttgcctgatgtgttgaaattgatctgtgctttggctgcacatcggaaatttgctgca
ttgtttgtggatcgtggtggtatacaaaaacttcttgcacttccgagaacgcccctcaca
ttttctggcctctcttcttgtctatttgcaattggttcacttcagggaataatggagcgt
gtatgtgctcttccttcagaagtcatccaccaactaatctcactagcactccaactccag
gaatgcccacaagaccaagcaagaaaaaactccgccttatttttcgcctctgccttcgtt
ttccgagccgtaatcgatgcattcgacaaccaagacggcctccaaaagcttctaaacctc
ttaggcgaagccgcatccgtaagatccggcgccacatcagcatccgtgggcccctccgct
acaaacccactgcggaccccaccggaagtgctgacatcatcagaaaaacaaatcgcttac
cacacaactgttgcgttacgccagtattttagggcgcaccttttgttgcaggtggactcg
attcggcctaataagaatcttaaaagtgctccacggaatattcccagctctagggcggct
tataagccacttgatattagtaatgaggctatcgatgcggtgtttcgtcagatacagaag
gatcgaaagcttgggcccgcgtttgtcagagccaattggcctgctgttgaaaagtttgtc
aattgtaatgggcatactaccatgttggaattgtgtcaggcaccacctgttgagagatat
ttgcatgatttgcttcaatatgcattgggtatcctgcatattgttacattggttcctaat
agtcggagaatggtagtgaatgctactctgagtaatgatcgtttaggtatagcggttatt
cttgatgcagcaaatggtgctggttttgttgatcctgagattattcagccagcactaaat
gttttggtgaatcttgtctgccctccaccatcaatcagtatgaagccaacaatgccagga
ggacaaggacagatgtcatccacccaaccatcaagttcaaaccctccttccacatcagag
ccagctgtcaacctgaatggagaatccaccggggggcaggcgacacctggcgcctgctct
ggactagttggtgaccggagaatctcattaggcgccaaacaaggcggtccttcttccggg
cttgctgcacagatggaacaagggtaccgccaagcaagagaggtggttcgagccaataac
ggtatcaaagttctgcttcagctcctccagccacggattatcacaccatctaccgccctt
gactgccttcgtgctctcgcctgcagagttttgcttggtttagcaagagatgataccatt
gctcacattttaacaaaacttcaggttgggaaaaagttatcagagcttattagggattcg
ggtagccagatgccaagtggcgaacagggaaggtggcagacagaactatctcaggttgca
attgagctgatggcgattgttacaaattcagggagagcaagtacattggctgctactgat
gctgctactcctactctgaggagaattgagagagctgctatagctgctgctactcctatt
acttatcactctagggagcttttactgctgattcatgagcacctacaagcatctggttta
tcgacaaccgcagctcaacttctaaaagaagctcaattaacacctttacaatcattagcc
gccccttcatctctcgcataccaaacctccggtcaagaaaccgcatcactacaaatccaa
tggccctccggccgctcctcttccggctttctcactaaagaaaaatccaaaccacaagac
gatctaaaccactcatctttctcctcaaaaagacgacctttagttttattatccccaaca
accgccaaaaccaccaactcctcaaaaaaaccacccatacctccgacatcagaacctccc
gccacctcagaagtggataattctgattgtatcctcaaaaccccaatcatattacccctg
aaacggaagctcaccgagttgcgtgactttggaccatcatcatcgagcaaaagactcaac
accagcgaccttggattccggtctccggtgggtcccacacctactaccaaccggaaaaac
actttactaggtgacactccgttctcctctagaacaccgggaaccgttgtatctgacaat
ttagatgataataacgcacacagccacgggattgctgacacgcaagcgaatcccgagcgg
ttaaccttggattcaatcgtggttaattatttaaaacaccaacaccgccagtgcccagct
ccgatcaccaccctaccgccgctctctctcctccacccacacgtctgtcccgaatcaaaa
cgcagcctcgacgcaccatcaaacatcaccgcccgcctcaacacccgtgaattcagaaac
atgtatggcggcatccatggcagccgccgcgaccgccagttcgtgtacagtagattccgg
ccatggcgcacatgtagagacgacactggcgtgttactcacctgcatcacattccttggc
gactcctcccaaattgccgccggtagccactccggtgaactcaaagtctttgattcaaac
accaacaacatgctcgaaagcagccctggccaccagttcccgttaaccatggttaaatct
ttcatctccggggacacacagttacttctctcttcaagctcacatgatgtgagattgtgg
gacgcgccctcagtgtctgcgggacccaaatactcgtttgatgggattaaggctgcgaca
tttagtcattgtgggacgatgtttgcggctttgtcttctgagttatcaagacgcgagatt
ttgttgtacgatgttcaaacgtgtaaatctgatttgaaacttacggatccatcttctaat
gcttcaagtaaaggacacgcttattctcaggttcattttagtccttcggatattatgctt
ctgtggaatggcgtgttgtgggaccggagagttccgggccccgttcaccggttcgaccag
tttaccgattatggtggtggtggatttcatcctgctggaaacgaggtaattataaattca
gaagtgtgggatctacgaaacttcaggcttcttcggagtgtcccatctttagatcaaaca
gtaatcacattcaacgcaagtggcgatgtcatatacgcaatcctaagaagaaatctagaa
gaagtgacatcagcgttccaaactcgccgagtcaaacatcctctgttttccgctttccga
acaatcgacgcagtcaactactcagatgtcgccacctgtcctgtcgaccgatgcgttctt
gatttcgctaccgaaccgactgattcctttgtcggtcttgtcacgatggacgatcaggat
gagatgtattcgtctgcccgggtttatgaaatcgggcggcggaaaccgaccgatgatgat
tccgaccctgatgatgcggagagtgaggaggaagatgaggatgatgatgacgaggatatt
gatgatgatgcgttgttggcaaatgatgaagatggtgatatgagtaatgatgaggatagt
ttgagtgatcttgatgatgatgaggatggggatgatgatgatgacgatgatgatgatggg
gattttgtgatggatggggtggattttggtggtggtgggatatttgagattttgagtgag
gatggagaggaaggggatgatgaagatgatgatgagatgattgagtctttgagtagtgga
gatgaggattttattggaggattttaa
DBGET
integrated database retrieval system
