KEGG   Lactuca sativa (garden lettuce): 111885534
Entry
111885534         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111885534
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111885534
Enzymes [BR:lsv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111885534
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111885534
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-rbx1 Prok-RING_4 zf-RING_10 Rtf2 CR_prot_dom_plant RING_XB3-XBAT31 zf-ANAPC11 PRIMA1 zf-RING_6 Sina_RING TRAF3_RING zf-RING_4 zf-Nse
Other DBs
NCBI-GeneID: 111885534
NCBI-ProteinID: XP_023737555
LinkDB
Position
9:15174638..15176483
AA seq 222 aa
MSTKPPVVKYARGGGRQRKGGLDLNVPPPNENQEQAGGPTVSVSQTSITTAPTIPGSALP
APIDVEELDDDVVISSPRAFEEAKKKSQRIRKRPLVVDVEPEEVSARIIGQNNHGNKRKR
GAGIPPVINCEMYVNLEGGSSGSMRVRAPPPPPPPPPPPPPEPTFSCPVCMGSLVEEVTT
KCGHIFCKACIKAAIKAQSKCPTCRRKVTNKDIIRVYLPTAK
NT seq 669 nt   +upstreamnt  +downstreamnt
atgagcactaagccgccagttgtgaagtatgcaagaggtggtggtagacaaaggaaagga
gggctggatctgaatgttcctcctccaaatgaaaaccaagaacaagcaggagggccaact
gtttcagtatctcagacttccataactactgctccgactattccaggatcagcactacct
gctcccattgatgttgaggaattggatgatgatgttgttatatcctcccctagagcattt
gaagaagctaaaaagaaatcacaaagaattcgaaaaaggcctttggtggttgatgtggaa
cctgaagaggtttctgctaggatcattggtcaaaataaccatggaaacaaacggaaaaga
ggtgctggaattccaccagttatcaattgtgagatgtatgtcaatttggaaggaggaagc
agcggttctatgagagtgagagcaccaccaccgccaccaccaccaccaccaccgccgcca
ccggagccgaccttcagctgtcctgtttgcatgggatcattagttgaggaggtgacaaca
aaatgtggtcatattttctgcaaggcgtgtatcaaggctgcaattaaggctcagtctaaa
tgtcctacatgtaggcggaaagtcacaaacaaagatattattagggtttaccttcccacc
gcaaagtga

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