Lactuca sativa (garden lettuce): 111885710
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Entry
111885710 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111885710
KO
K14411
RNA-binding protein Musashi
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111885710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111885710
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111885710
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111885710
NCBI-ProteinID:
XP_023737720
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Position
3:144458520..144462884
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AA seq
406 aa
AA seq
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MSEKKLVVLGIPWDVDTDGLKDYMSKYGDLEDCIVMKERSSGRSRGFGYVTFATVEDAKA
ALASEHFLGNRALEVKIATPKEEMRAPSKKVTRIFVARIPPSVTEDEFRSHFDKFGEITD
LYMPKDPSTKGHRGIGFITFATADSVDDLMSETHELGGSTVVVDRATPKEDDFRPVSRMS
HGGSSGGGGGGGGGGGGGGGYGAYNAYVTTRYAALGAPTSYDYPGPIYGRGESTRGMGKK
IFVGRLSQDASVEDLRQYFGRFGRILDAYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRS
HEICGQQVAIDSATPVDDGGSSGGGGGAYLENPEPYGGSYGPMRGYGRMYGSLDFDDWGY
GGMGRMGGMGRMGGGMGGLSGGMGGLGGSMGGGGRSSRSDMRYRPY
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaaaaaactcgtggtattgggcatcccttgggatgtcgataccgatggtctg
aaggattacatgagcaaatatggcgatttggaggactgcatcgtgatgaaggagcgctca
agtggtcgatctcgtggttttggatatgttacctttgcaacagttgaagatgccaaggct
gcacttgcgagtgaacacttcctagggaatagagcacttgaagtaaaaatagccacacca
aaggaggaaatgagagcaccttcaaagaaagtcaccaggatatttgttgctagaattcct
ccctcagttacagaagatgaattcaggagccattttgataaatttggtgaaattacagat
ttgtacatgcccaaggatccaagcaccaaagggcatcgtggaattggtttcattactttt
gcaactgctgattctgtggatgatctcatgtctgaaacccatgaactaggggggtcaact
gtggttgttgaccgagcaacacccaaagaagatgatttccggccagttagccggatgtct
cacggcggcagtagcggtggtggtggtggtggtggtggaggaggaggaggaggaggagga
tatggtgcatataatgcgtatgtgacaactagatatgctgcattaggtgctcctacatca
tatgattacccgggccccatttatggaagaggcgagtcaactcggggaatgggaaagaaa
atctttgttggtaggctttctcaggatgctagtgtagaagatcttcgccaatattttgga
agatttggaagaattttggatgcttatgtcccaaaggatccaaaaagatctggtcacaga
gggtttggttttgtgacatttgctgaagatggtgttgcagatcgtgtgtcaagaaggtca
catgagatttgtggacaacaggttgcaatagattcagctacacctgttgatgatgggggg
tcaagtggaggaggaggaggggcatatttggaaaatcctgaaccgtatggaggtagttat
gggcccatgcgaggctatggaagaatgtatggaagcttggattttgatgattggggttat
ggtgggatggggaggatgggaggaatggggcggatggggggaggtatgggcggcttaagt
ggcggcatgggcggcttaggtggaagtatgggcggtggtgggagatcttcaaggtcggat
atgaggtataggccttattag
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