Lactuca sativa (garden lettuce): 111885811 Help Entry 111885811         CDS       T05352                                  Name (RefSeq) vacuolar sorting protein 39   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism lsv  Lactuca sativa (garden lettuce) Pathway lsv04148   Efferocytosis Brite KEGG Orthology (KO) [BR:lsv00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     111885811  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lsv04131]     111885811 Membrane trafficking [BR:lsv04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     111885811 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H DUF2175 AlaDh_PNT_N Motif Other DBs NCBI-GeneID:  111885811 NCBI-ProteinID:  XP_023737817 LinkDB All DBs Position 3:112910566..112915886 Genome browser AA seq 998 aa AA seqDB search MVHTAFDSLELLNGCPTKIDAVESYGSNLLVACADGSLRIYGPESSTSSADRSPPSDRHS KTLELKREPYVLERTVNGFSRKPMLAMEVLGSRELLLSLSESISFHKLPNLETLAVITKA KGANAYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFSVPDTVKSMSWCGENICLGI RREYTILNATNGALSEVFPSGRIAPPLVVSLPSGELLLGKDNIGVLVDQNGKLLQEGRIC WSEAPAVVVIQKPYATALLQRHIEIRSLRVPYPLIQTVVLRDVRLIHQGNNAVIVALNNS IHGLFPVPIGAQIVQLTASGNFEEALALCKLLPPEDSNLRASKEQSIHIRYAHYLFENGS YEEAMDHFVASQVEITYVLSLYQSIVIPKSSVVSGPEKFLDMSGEVYLSRASSGVSDDME TSSTSHTLEYDESSALESKKMSHNTLMALVKFLQKKRNSVIGKAAAEGTEEVISDAVGHS HESNRSKRSNKGRVNMPLDSGAREMALILDTALLQALLLTSQSTAALDLLKSLNYCDVKI CEEILRNGNHYLCLLELYKWNSMHREALKLLHKLVNESKSDQKFKPEMIIEYLKPLCGPD PMLVLEFSMHVLESCPSQTIDLFLTGNIPADLVNSYLKQHAPKMQAMYLELMLSMNENGI SGNLQNEMVQIYLSEVLDWYNDLIGEKKWDEKSYTASRKKLLSALEGISGYNPEILLKRL PPNALYEERAILSGKMNQHELALSIYVHKLHVPSLALSYCDKLYEAGLHQHQTPKTNIYL TLLQIYLNPKKTIKNIEKRIANLVSSSSSPSPKVGWTSVKTKAKGLGKKIADIEGAEDSR ISPSGTDSGKSDDGDGDDFGEEVVSNIMLDEVLDVLGQRWDRVNGAHALKLLPKETKLHN LLPFLGPLLRKTSEAHRNFSVIKRLRECQNLQTKDELYSQRKVDVKITGESMCSLCNKKI GTSVFAVYPNGNTIVHFVCFRDSQNMKATGKGSSLRRR NT seq 2997 nt NT seq  +upstreamnt  +downstreamnt atggtgcacactgcattcgattcgcttgaactactcaatggttgccccacgaagatcgac gcggttgaatcctatggctcaaacctactagtcgcttgtgccgatggatctcttcgaatc tacggcccggaatcctccacctcatccgctgacagatctccaccgtccgatcgtcattct aaaaccctagaattgaagagggaaccatacgtgctcgagagaactgtcaatggattctcc aggaagcctatgctggctatggaggtgttggggtctagagagcttctgctttctctctcc gagtcaatttcgtttcataagctcccgaatttggagacgctagcggtgattacgaaggcg aaaggagctaatgcttactcgtgggatgatcgcagagggttcttgtgctttgctaggcaa aagagggtttgcattttcagacacgatggaggtcgtggatttgtggaggtgaaagagttt agtgttccagatacagtgaagtcaatgtcttggtgtggcgagaatatatgtcttgggatt agaagagaatacacgatattgaacgccaccaatggtgcactttcagaggtcttcccctca ggaagaattgctccaccattagtggtgtctcttccatctggagaacttcttttagggaag gacaacattggagttcttgtggaccaaaatggcaagctccttcaagaaggcaggatctgt tggtctgaagcccctgcagtagttgtcattcagaagccttatgctacagctcttttacaa agacacatagagatacgttctttacgagtcccttacccattaatacaaacagttgttctt cgtgatgtccgccttattcaccaaggaaacaatgcagtgattgttgccctaaacaactcc attcatggattgttccctgttcctattggagcacagattgtacaattgacagcatctgga aactttgaggaagctttagcattgtgtaagctacttccaccagaagattcaaaccttcga gcctcaaaggaacagtcaattcatatcagatatgcacactatctgtttgaaaatgggagc tatgaggaagccatggatcattttgtggcatctcaagtggaaataacttatgttctttct ttatatcaatcaattgttattccaaagtcatcagtggtttctggacctgagaagtttttg gatatgagcggtgaagtttacttatcaagagcttcatctggtgtgtcagatgacatggaa acttcttcaacttctcatacactggaatatgatgaaagctcagctcttgaatccaagaaa atgtctcataacacattaatggcattagtaaagtttctacagaagaagagaaacagtgta attggaaaagcagctgctgaaggaactgaagaggttatatcagatgctgttggacactcc catgaaagcaatcgatccaaaagatcaaacaaggggagagtcaacatgccccttgactca ggtgctagagagatggcattgatattagacactgcacttctacaagctttgcttttaacc tcacaatctacagctgctttggatttactaaaaagtttaaattattgtgatgtgaaaata tgtgaggaaatattaagaaatggaaaccattatttatgtttattagagctttataaatgg aactccatgcatcgtgaagctctcaagcttcttcataagctagtcaacgagtcaaaatca gatcaaaagttcaaacctgagatgataatcgaatatctcaaacctttatgtgggcccgac ccaatgcttgttctggaattctcaatgcatgttcttgaaagctgtccaagtcaaaccatt gacctgtttttgactggaaacatccctgcagatttggtcaactcttatttaaaacaacat gctcccaaaatgcaagctatgtatttggaattgatgctttcaatgaatgaaaatggaatc tctgggaatcttcaaaatgaaatggtgcaaatatatctttcagaagtgcttgattggtat aatgatctgattggtgaaaagaagtgggatgaaaaaagttacacagcatcaaggaaaaag ctgttatcagcattggagggtatttctggatataatccagagattttattgaaaagatta cctccaaatgctttgtatgaagaacgtgcaatcttatcagggaaaatgaatcaacatgaa cttgcattgtccatttatgttcataagcttcatgttccaagcctagctttatcctactgt gacaaattatacgaggcaggacttcatcaacaccaaactccaaaaaccaacatctacctc acgttacttcaaatctatctaaaccctaaaaaaacaataaaaaatatcgaaaaaagaatc gcaaatcttgtatcttcatcgtcatctccaagtcctaaagtcggttggacatccgtaaaa accaaagcaaaaggattaggtaaaaaaatagcagacatcgaaggcgcagaagattctaga atcagcccaagtggaaccgatagtgggaaaagtgatgatggagatggagatgattttggt gaggaagtcgtttccaatatcatgcttgatgaggttcttgatgtgttgggtcaaaggtgg gaccgggtcaacggtgcacatgcactcaaacttttacctaaagaaaccaaactacataat ttgcttccgtttctcggacctcttttgagaaagacgagtgaagcgcatcgcaacttttcc gtgattaagagattgagagaatgtcagaacctccaaacgaaggatgagttgtatagccag agaaaagtggatgtgaagatcacgggagagagtatgtgttctctttgtaacaagaagata gggactagtgtttttgcagtgtatccaaatggaaacacaattgtgcattttgtttgcttt agggattctcagaatatgaaggcaactggaaaagggtcgtccctaaggagaagatag

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