KEGG   Lactuca sativa (garden lettuce): 111885918
Entry
111885918         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111885918
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111885918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsv03041]
    111885918
Spliceosome [BR:lsv03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111885918
 Complex B
    111885918
SSDB
Motif
Pfam: RRM_1 RRM_9 RBD_DEAH11 GIT_SHD
Other DBs
NCBI-GeneID: 111885918
NCBI-ProteinID: XP_023737919
LinkDB
Position
1:95395398..95399070
AA seq 708 aa
MRKPLGHKEKYSNRYEISQSHSIDGTAARTRPYSFDEIMLRRKNKKLSVNVEDQRLASEI
VYPKEAESVSGRVESDRHRQRDEQPAPNEPLTVSSRTKENKSMREDQKRVEGEHKESGDL
QRRSKAGSDNTKDRRKERGVHDFGNEHEKRHGKDSSVKERDRNVERNRGKSEHVNRLNQN
GYDERNRDKKLESRKRHEREKRRSNSPSPKGNKPRLYDVKDHEELLSSSHSSKAGRFDPN
LDRKRVSNNGSINKPKRHDSSVSRLCGYSPRKRRNEAPSPTESSPVKIESKTPNPLTSFL
PNLMSLNKIELPNMVPLTPSVPIPKPTFGLLSFPSLMNTSVDSVQLTQATRPKRRIYVEN
LPSSASEAAVVEWLSGYLRPYGLNHLQSTNPCISCIVNKDKCQALVEFLTPEDASTALSF
DGRSFNGNILKIRRPKDYVEATTGVLEKQPVAVAGGAFSVKNIVQDSPNKIFIGGISKII
TSQMIMEIASAFGPLKAFHFEHNSNLDTTPCAFLEYVDQSVTIKACVGLNGMKLGGQLLT
VTQATPDNTSSMEKNHGDNDHPFYGTPAHAQPLLQKQTQVLKLNNLVDPQSLSSLSEQEF
EEIVEDVRLECSRFGMVKSVNIVKPAKVLSTSSDKEPPPEDVAAPTGGGDGGGAVVEERF
EGGCVLVEYKRIEASTMAAHCLHGRVFDGRIVSVEYVGHDVYCDKFEK
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgagaaagcctctagggcacaaggaaaagtactcaaacagatacgagatctctcagagt
cactccattgatggcaccgctgcaagaacaagaccttatagcttcgatgagataatgctt
agaaggaaaaacaaaaaactatctgtaaatgttgaagatcaacgacttgcttcagagata
gtctaccctaaagaagccgaaagtgtctctggtcgtgtagaatctgatagacacagacaa
agggatgaacaacctgctcctaatgaacccttaactgtaagttcaagaacaaaagagaac
aaatccatgagggaagaccaaaaaagagtagaaggtgaacacaaagaaagtggcgatctt
caaagaagatcaaaggctggtagtgataacacaaaagatagaagaaaagaaaggggtgtt
catgactttggtaatgaacatgaaaagagacatggtaaagattcttcagtaaaagaaagg
gacagaaatgttgagaggaatagagggaaatctgaacatgtcaacaggctgaatcaaaat
ggatacgatgagagaaatagagacaagaaacttgaatcaagaaaaagacatgagagagag
aaaagaaggtcaaattcaccatcaccaaagggaaataaaccaagattatatgatgtgaaa
gatcatgaagaattgttatcctcctcacattcttcaaaagcaggaagattcgatcccaat
cttgacagaaaaagggtatcaaacaatggttcaatcaacaaacctaaaagacacgattca
tctgtaagtcgcctttgtggctattcaccaagaaagagaagaaacgaagctccatctcca
actgaatcatcacctgtgaagatcgaatcaaaaactcctaatccattgacttcttttctt
ccaaatttgatgtcattaaacaaaattgaactccctaacatggttccccttactccaagt
gttccaattccaaagccaacatttggacttctttcatttccttcattgatgaatacatca
gttgactctgttcagttgactcaagcaacaagacctaaaagaaggatttatgtagaaaac
ctgccatcttcagcctctgaagcagctgtagtggagtggcttagtggttatcttcgacct
tatggtttaaatcatcttcagagcactaatccatgtattagctgcattgtgaataaggat
aagtgtcaagctcttgtggaatttctcacacctgaagatgcttctactgctttaagcttt
gatggaaggtctttcaatggcaatattcttaaaatcagacgccctaaagactatgttgaa
gcaactactggtgtgttagagaagcagcctgtagctgtagctggaggagctttttcagtt
aaaaacattgttcaagattcccctaataagattttcattggtgggatttcaaagattatt
acttcccaaatgattatggagatcgctagtgcttttggacctttaaaagctttccatttt
gagcataattcaaatcttgatactactccatgtgccttccttgagtatgttgatcaatca
gtgactatcaaagcatgtgttggtcttaatggaatgaaattgggtggtcaactcttgact
gtaactcaagcaactccagataatacttcttcaatggaaaaaaatcatggagacaatgac
cacccgttttatggtacacctgcacacgcacaaccgcttctccagaaacaaacacaagtc
ctcaagctcaataatttggtggacccacagagcctatcatcactctctgaacaagaattt
gaagaaatagtagaagatgtacgcctcgagtgttccaggtttggcatggtgaaatcggtt
aatattgtgaagccagccaaggtgctgtctacaagctcagataaagagccgccgcctgaa
gatgtggcggctcctactggcggcggtgatggtggtggcgcggtggtggaggagaggttt
gagggtggttgtgtgttggtggagtataaaagaatagaagcttctacaatggcagctcat
tgtttacatggaagggtttttgatggaagaattgtgagtgtggaatatgttggacatgat
gtttattgtgataagtttgaaaaatga

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