Lactuca sativa (garden lettuce): 111885992
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Entry
111885992 CDS
T05352
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111885992
03036 Chromosome and associated proteins [BR:
lsv03036
]
111885992
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111885992
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111885992
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111885992
microRNA pathway
RISC loading complex
111885992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
111885992
NCBI-ProteinID:
XP_023738002
LinkDB
All DBs
Position
1:76906496..76912499
Genome browser
AA seq
982 aa
AA seq
DB search
MSGRGRGGGGGGRGRGRGGGQPSQSHSQDAGGRGNAAPRVPPQTVASTVTQFGNLSVGSS
TPSPSTAPAAARATAAGTVPQQPVMQQNPVQTPPAPVVSAQQPITKAAQPPQASSAAPTS
SRIIKAPPRTGYGTLGRKCVIRANHFLVDLGEKDPYQYDVTITPEVISKTRSREILKLLS
ELYKQSHLGNMLLAYDGKKSAFAAGPLPFESKEFVVKLNESNGREKEFKVNIKFVSRKDL
HHLRQFLSGRQHDNPQETIQALDVVLREAASINDRQIIGRSLFSAEFGKGVLGDGIEYWK
GFYQSLRPTQMGLSLNIDMSARAFYETKLVTEFVGEFLGKDLMRPLSDQERIKVKRALRG
VRVEVRRENYMRRYKVQALTVQPTNQLTFPVDDTGKTMSVVQYFREKYNIHLRYPHLPAI
QAGSDAKPTYLPMEICRIAGGQRYALKLNEKQVTNFLRATCQRPLDREASIKNTMVSNNY
NANPLVSQAFGLAVKEQLTMIDARVLPPPHLKYHGTGAGSEINPSVGQWNMMNLKMINGG
TVNYWAIANFSRHREDAVGRFIHGLVTMCQNRGIVFNPQPLIPMYNSAPNYIEKALVEIH
TQCTAQLQKVAPGNSLQLLFVILPDAKGTYPRIKRVCETELGIISQCCQPKNVMKLSNQY
FENVAMKINVKVGGRNSVLAAALANRLPYITERPTIIFGADVTHPSPGEDSSPSIAAVVA
SMDWPQVTKYKALVSAQPHRQEIIEDLYSTTTDARRGVIHTGLIRELLISFKKSTGHKPH
RIIFYRDGVSEGQFNEVLMSEMDKIRKACASLEEGYMPPVTFIVVQKRHHTRFFPMKHGD
KASTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENKFTPDGLQ
NLTNCLCYTYQRCTRSVSIVPPAYYAHLAAFRARYYMEGAELSDSGSSHGGGAGGRATRD
RVAEVRPVPVIHENVKSVMFYC
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaggggccgtggtggcggtggtggtggccgtgggcgagggcgcggcggcgga
caaccgtcgcaatcgcattctcaggacgccggcggtagaggaaatgccgcccctcgagtg
cctccacagacggttgcttcgactgtgactcagttcggaaacctttctgttggttcatcg
accccgtcgccgtcaaccgcacccgccgccgctagggcaactgctgctggtacagttccg
cagcaaccggtaatgcaacaaaatccggttcaaactccccctgcgccagtggtttccgct
cagcaaccgattacgaaagcagcacaacctccgcaggcttcatcggcggcccctacttca
tcgagaatcattaaggcaccgccaaggactgggtacggaactctaggtcgtaaatgtgtt
atccgagcgaatcattttctcgtcgatctcggcgaaaaggatccctatcagtatgatgtg
acaatcacacctgaggttatttcaaagactagaagtcgtgagatcttgaagcttctcagt
gaattatacaagcaatctcatctgggaaacatgttattagcctatgatgggaagaaaagt
gcatttgctgctggacctcttccatttgaatcaaaagaatttgtggtgaaactcaatgag
agtaatgggcgtgaaaaggaattcaaggtgaacattaagtttgtttccagaaaagatctg
caccatttgagacagtttttaagtggtagacagcatgataatccacaagagaccattcaa
gctcttgatgttgttctaagggaggcagcttcaataaacgaccgacaaatcattggtaga
tctttatttagtgctgaatttgggaaaggtgtgcttggtgatggaattgaatattggaaa
ggattttatcagagtctgcgccctactcaaatgggtttatccttaaacattgacatgagt
gccagagcattctatgaaacaaaactagtcactgaatttgttggggagtttcttgggaaa
gatttaatgagacccctttcagatcaagagcgtataaaggtgaagagagcattgagaggt
gtgagggtggaagtgaggcgtgagaattatatgagaaggtacaaggttcaagcattaaca
gtccaaccaaccaatcaactgactttccctgttgatgatactggaaaaaccatgtctgtt
gttcagtacttcagagagaagtacaacattcatcttaggtatccacatcttcctgcaatc
caagctggttctgatgcaaaacccacatatttgccaatggagatttgtaggattgctggt
ggacagcgatatgctctgaagcttaatgagaagcaagtgacaaactttcttagggctaca
tgccagcgtccacttgacagggaagctagcatcaagaatactatggtaagtaacaattac
aatgccaatccgcttgtgagccaagcctttggactggctgttaaagagcagctgacaatg
atagatgcccgggtccttccacctccacatctcaagtaccacgggacaggggctggttca
gaaatcaatccatcagttggtcaatggaacatgatgaacctgaaaatgatcaatggaggc
acagtgaattactgggcgattgccaacttctcacgccacagggaagatgctgttgggcga
tttattcatggactggttaccatgtgtcagaacagaggcattgtgtttaatccccaacca
ctgattccaatgtacaactctgctccaaactatattgaaaaagctttggttgaaattcac
acccagtgtacagcccaacttcagaaggttgcacctggcaactcacttcaactattgttt
gtgattcttccggatgcaaaaggaacttatccaagaatcaaacgggtatgtgagaccgag
ctgggaatcatttcccaatgctgtcagccaaaaaatgtcatgaagcttagtaatcagtac
tttgaaaatgtggcaatgaagatcaatgttaaggttggtggaagaaactcagtcttggct
gcagctcttgctaatagacttccctacatcacggaacgcccaacaataatttttggagct
gatgtaactcatccttcacctggagaggattcaagcccttccattgctgcggtggttgct
tcaatggattggcctcaagtgacaaagtataaagccctagtatccgcacagccccacaga
caagagatcattgaggatctgtactcaaccacgactgatgcaagaaggggagtgattcat
actggcttaatcagagaacttttgatttcctttaaaaaatcaactggtcataaaccacat
aggatcatattctacagggatggtgtgagtgaggggcagtttaatgaagtcttgatgagt
gaaatggataaaatccgcaaggcttgtgcctcattggaggaggggtatatgccacctgta
acattcattgttgtgcaaaagaggcatcacacacgtttctttcctatgaagcatggagat
aaagctagcactgacaggagtggcaacattcttccagggactgttgttgacaccaagatt
tgccacccaacggagtttgatttctacctgtgtagtcatgctggtattcagggaacaagc
aggccaacacattaccatgtgttgtatgatgagaataagttcactcctgatggtctccaa
aatctaacaaactgtctatgctacacctaccaaaggtgtacaagatctgtgtccatagtt
cctcctgcttactatgcgcatttggctgcatttcgtgcccggtattacatggagggggct
gaattgtctgacagtggttcttcacatggagggggagctggggggcgtgcaacaagagac
cgggttgctgaagtgcgtcctgtccctgtgattcatgagaatgttaagagcgtcatgttc
tactgttag
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