Lactuca sativa (garden lettuce): 111886150
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Entry
111886150 CDS
T05352
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03410
Base excision repair
lsv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111886150
03450 Non-homologous end-joining
111886150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111886150
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111886150
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
111886150
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
111886150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
HHH_5
NTP_transf_2
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
111886150
NCBI-ProteinID:
XP_023738146
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All DBs
Position
9:complement(144811899..144816372)
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AA seq
511 aa
AA seq
DB search
MAPKASKNRSPPSDPDGIFSGMVVFLVDNDVQRRRLEIWKQKLVQMGAIIEEEKLSKNVT
HVFAVNSDSLRKKFGQKLSQRFKGIILRYQWLEDSLHLGKKVNEESYTIHLDSSQNPPKN
SSNENSIKPTDVKESSDNQLHPHKKLKSSPKTSEGSSSEMKDKSLDEKVNAPDASLPYHP
PDLNRDITEIFGKLINIYRALGDDRRSFSYYKAIPVIERLPFKIESVDQVKHLPAIGKSM
QDHINEIVTTGKLSKLEHFESDEKVRTISLFGEVWGIGPATALKLYEKGHRSLEDLKSDD
TLTKSQCLGLKYFDDIKTRIPRDEVQEMECLLQKAGEDVLPGVNVVCGGSFRRGKASCGD
MDIVITHPDGKSHVGFLPKYVNHLKDMKFLREDLVFSIHSEQGTDSGVDTYFGLCTYPGR
ELRHRIDLKVYPKEIYPFGLIAWTGNDVLNRRLRILAESKGFRLDDTGLFPATQGSGGKR
VSASTSLKFNSEKEVFEFLGFPWLEPHERNI
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaggcgagcaagaaccgttctccaccgtcggatcctgacggaatcttctct
ggaatggtcgtcttcctcgtcgataatgacgtccaaagacgtcgtttagagatatggaag
caaaagctagtgcagatgggagcaatcatagaagaagaaaagttgtctaagaatgtgact
cacgtctttgcggttaactccgactcacttcgcaagaaatttggccagaaactatcacag
cgcttcaaagggatcattcttcgttatcagtggttggaggacagcttgcatctaggaaag
aaagttaatgaggaatcatacactatacatttggattcatcccaaaatcccccaaaaaat
tcatctaatgagaactctattaaacccactgatgtgaaagaatctagtgacaatcagtta
cacccccataaaaagctgaaatcctcacccaaaacctcagaaggttctagttcagaaatg
aaggacaagtcattagatgaaaaggtcaatgcaccagatgcttcgttgccatatcatcct
cctgatttaaatagagatatcacagaaatatttggcaagcttatcaatatatatcgagct
ttgggtgatgatcgaagatctttcagctattacaaggcgattccagttattgaaaggttg
ccatttaaaattgaaagtgtggatcaagtcaaacatttacctgctattgggaagtcaatg
caggatcatataaatgagattgtaactacagggaaattgtccaagttggaacactttgag
agtgatgaaaaggtaaggacaattagtttgtttggggaagtatgggggattggtccagca
actgcattgaaactgtatgaaaaaggacacagaagtctggaggatttaaaaagtgatgac
acattgacaaagtcacagtgtttagggttgaagtattttgatgatatcaaaacaaggata
ccacgtgatgaggtgcaagagatggagtgtttgctacagaaagctggagaagatgtttta
cctggtgtgaatgttgtgtgtggaggatcattcagacgtggaaaagctagttgtggggat
atggatattgtgattacacatcctgatggaaaaagtcatgtagggtttctacccaagtat
gtaaatcatttgaaggatatgaagtttttaagagaggatttggtcttcagtatccatagt
gagcagggcactgattctggagttgatacatactttggtctttgcacatatcctggtagg
gagctgaggcatcgaattgatttgaaggtgtacccaaaggaaatatatccatttgggcta
attgcatggacagggaatgatgtgttaaatagaaggctgagaatacttgcggaaagcaaa
ggattccgattagatgacacagggctcttccctgcaactcaaggttctggagggaaaagg
gttagtgctagcacaagtttgaaatttaactcggaaaaggaagtgtttgagtttcttgga
ttcccgtggcttgaaccgcatgaacgaaatatttaa
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