Lactuca sativa (garden lettuce): 111886151
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Entry
111886151 CDS
T05352
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111886151
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111886151
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
111886151
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111886151
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
HEAT_2
HEAT
HEAT_EZ
HEAT_ECM29
TOR1L1_N
CEP104-like_TOG
GNC1_N
Htt_N-HEAT_1
mTOR_dom
MMS19_N
Dopey_N
PPP2R1A-like_HEAT
Xpo1
Telomere_reg-2
Motif
Other DBs
NCBI-GeneID:
111886151
NCBI-ProteinID:
XP_052623879
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Position
9:144560571..144571972
Genome browser
AA seq
1218 aa
AA seq
DB search
MANSSIPGILEKMTGKDKDYRYMATSDLLNELNKEGFKLDSDLELRLSNIVLQQLDDAAG
DVSGLAVKCLAPLVKKIHEAQVLEMTHKLCDKLLNGKDQHRDIASIALKTIFSEVPTSSV
AQSVLVSVSPKLIGGITSPAMKTDIKCECLDILCDILHKFGNLMTSDHEMLLAALLPQLS
SNQASVRKKTVSCIASLASSLSDDLLAKATIEVVRLLKNKGTKPEMTRTNIQMIGALSRA
VGYRFGPHLGDTVPILIQYCKNASENDEELREYSLQALESFLLRCPRDIFSYCNEILHLT
LEYLSYDPNFTDNMEEDTDDEVHDDDEDDDSANEYTDDEDVSWKVRRAAAKCLAALIVSR
PEMLSNLYDEACPKLIDRFKEREENVKMDVFNTFIELLRQTGNVTKGQIDIDKLSPRWSL
KQEVPKVVKSVNRQLREKSIKTKIGAFSVLKELVVVLPDCLADHIGSLIPGIEKALCEKS
STSNLKIEALIFTRLVLASHSPAVFHPYIKAISAPVLSAVGERYYKVTAEALRVCGELVR
VVRPNIEVSDFDFKPYVHPIYNAILSRLTNQDQDQEVKECAISCMGLVVSTFGDHLTAEL
LACLPVLVDRMGNEITRLTAVKAFAVIAASPLHLDLSCVLEHVIVELTAFLRKANRALRQ
ATLGTLNTLIVAYGDKIGSTAYEVIIVELSTLISDSDLHMAALALELCCTLMSDRRSGPT
VGLTVRNKVLPQALTLVKSSLLQGQALSALQNFFATLVYSANTSFDALLESLLSTAKPSP
QSGGIAKQALFSIAQCVAVLCLAAGDHKCSSTVKMLTDILKDDSTSNSAKQHLALLCLGE
IGRRKDLSSHAHIENIVIESFQSPFEEIKSAASYALGNIAVGNLPKYLPFILNQIDNQQK
KQYLLLHSLKEVIVRQSVDKAEFQDSSVEKILNLLFNHCESEEEGVRNVVAECLGKIALI
KPSKLVPALKERTTSPAAFTRATVVVAVKYSIVERPEKIDAVLYPEISSFLMLIKDQDRH
VRRAAVLALSIAGHNKPNLIKGLLPELLPLLYDQTVIKKELIRTVDLGPFKHTVDDGLEL
RKAAFECVDTLLDNCLDQLNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLA
VLDSLVDPLQKTVNFKPKQDAVKQEVDRNEDMIRSALRAVASLNRISGGDCSHKFKNLMA
EMGKSQSMWEKFCSIRNE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcatccatacctggtatcctggagaagatgactgggaaggacaaagattat
agatatatggcaacttcagacctattaaatgaattaaacaaagaggggtttaaacttgat
agcgaccttgagttgagattgtccaatattgttctacaacagcttgatgatgcagctggt
gatgtgtctggattagctgttaaatgtcttgctcctctggtgaagaaaattcatgaggca
caggtactggagatgactcacaagctatgtgataaactactgaatgggaaagatcagcat
cgtgacattgcaagcatagctctcaagacaattttttctgaagtccctacatcatctgtt
gctcaatcagttcttgtttcagtttctcccaagttgataggaggaattacaagccctgca
atgaagacagacataaagtgtgaatgccttgatatcttatgtgacattcttcataaattt
ggaaatctgatgacatcagatcatgaaatgctgttagctgcgctattgcctcagctaagc
tccaatcaagctagtgttagaaagaaaactgtgtcttgtattgcttctcttgcttcaagt
ctgtcagatgacttgttagcaaaggctacaattgaagttgttaggctgctgaagaacaag
ggaacaaaacctgaaatgacacgtacaaacattcaaatgattggggctttaagtcgtgcc
gtgggttatcgatttggtccacatcttggagatacagttccaattctaattcaatattgc
aagaatgcatctgaaaacgatgaggagcttcgtgaatatagcttacaggctttggaaagt
tttctacttagatgcccgagggatattttctcttactgtaatgaaattttacatcttact
ttggaatatcttagttatgatcccaatttcacggataacatggaagaggacactgatgat
gaagttcatgatgatgatgaggatgatgatagtgccaatgagtatacagatgatgaggat
gtcagttggaaagttcgaagagctgctgcaaagtgtcttgctgcattaattgtttctcgt
cctgagatgctctcaaatttatatgatgaggcttgtccaaagttgattgacaggtttaaa
gagagggaggaaaatgtcaagatggatgtttttaacacttttattgagttgctgcgtcaa
acaggaaatgttacaaaggggcagattgatattgacaaattaagtcccagatggtcactg
aagcaagaagtaccaaaggtagttaaatctgttaacagacagctgcgtgaaaagtctatc
aagacaaagattggcgccttttcggttctgaaagaacttgttgtcgttttgcctgactgt
cttgctgaccacataggatcactcattcctggaatagagaaagcactttgtgaaaaatct
tcaacctcaaatctgaagatcgaggcacttatatttacaagattagttttagcttcccat
tctccagctgtttttcacccatacatcaaggctatttctgctcctgttttatctgctgtt
ggtgaacgctattacaaagttactgcagaggcattaagagtatgcggggaacttgttcga
gttgtgcgcccaaacattgaggtttctgattttgatttcaaaccttatgtccatccaata
tataatgccatcttgtcgcgattgacaaaccaagatcaagaccaggaggttaaggaatgt
gctatttcttgtatggggcttgttgtttcaacatttggtgatcatctcacagcagaatta
ctggcatgccttcctgttcttgtagatcgaatgggaaatgagataacccgacttactgct
gttaaggcttttgcagttatagctgcatctccactgcacctagacctttcatgtgtccta
gaacatgttattgtggagttgactgcattcttacgcaaggctaatcgagcattaaggcaa
gcaacacttggtaccttgaatacactaattgtggcatatggtgataaaatcggttccact
gcttatgaagttatcattgtggaactttcaacattgatcagtgattcagatttgcatatg
gcggctcttgccttggaactctgttgtaccttgatgtcagacaggaggtctggtccaact
gttggtttgactgtcagaaataaagttcttccacaggctttgactttagtcaaaagctca
ttgcttcaaggacaggccctttcggctttgcaaaacttttttgctactttggtgtactct
gcaaacacgagttttgatgctttgttggaatctcttctttcaactgccaaaccatcgcct
caatctggtggtattgcaaaacaagccttgttttccattgcacaatgtgttgctgtactc
tgtcttgctgctggtgatcataaatgttcatctacagtcaagatgctcacagacatcttg
aaagatgatagcacttctaattctgccaaacaacaccttgcgttgctatgtttgggtgaa
attgggagaagaaaagatttgagctcacatgcgcacatagagaacatagttattgaatcc
tttcagtctccctttgaagagataaaatctgcagcctcttatgcacttggcaacattgct
gttggaaatcttccaaagtacttgccatttatcttgaaccagatcgataatcagcagaaa
aaacaatatctcttgcttcactctttgaaagaggtgatagtgagacaatctgtagataaa
gcagaatttcaagattctagtgttgaaaagatactaaacttgctattcaaccactgtgaa
agtgaggaagaaggtgtccgcaatgtagtagctgagtgccttggaaaaattgccctcatc
aagccttcaaaacttgtccctgccctcaaggagcgaacaactagtcctgctgcattcacc
agggcaacggttgttgttgcggtcaagtattccatagttgaacgaccagagaagatcgat
gccgtcctctaccctgaaatttcctcatttcttatgcttatcaaggatcaggaccggcat
gttaggcgtgcagctgttttggctttgagtatagctggccacaacaagccaaatctcatc
aagggccttcttccagaactcttgccacttctgtatgatcaaacagttattaagaaagaa
ctgatacgaacggtggatcttggaccttttaagcatacagttgatgatggtcttgagttg
aggaaagcagcttttgaatgtgtagatacattgcttgataattgtcttgaccagttgaac
ccttcttctttcattgtcccttaccttaaatctggtcttgatgatcattatgatgttaag
atgccttgccatctcatcctctccaaacttgctgacaagtgtccttcggctgtcttagca
gttctagattcattggtggatcctctccagaaaacagtcaactttaagcccaaacaagat
gctgtaaaacaagaagttgatcgcaatgaagacatgattcgaagtgcccttagagctgtt
gcatctttgaatcgtatcagtggaggagattgtagccataagttcaagaatttaatggct
gaaatggggaaatcacagtcgatgtgggagaaattctgttctatccgcaatgagtga
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