Lactuca sativa (garden lettuce): 111886165
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Entry
111886165 CDS
T05352
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00520
Amino sugar and nucleotide sugar metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111886165
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsv01003
]
111886165
Enzymes [BR:
lsv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
111886165
Glycosyltransferases [BR:
lsv01003
]
Polysaccharide
Structural polysaccharide
111886165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF948
Motif
Other DBs
NCBI-GeneID:
111886165
NCBI-ProteinID:
XP_023738163
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Position
4:106179139..106182746
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AA seq
645 aa
AA seq
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MKMSMKTWMRKPVLVLLFVTVLAPIVLYTDRLATFSSFSIDEYVSEPSTLSLNRDVRSRN
LLPQELSAAKEETASDVYLGKSTRSIQLLDGERSRKTRQLNEAYDLNATFNTHTSESKEH
DAIVIRQVTQGFHEADHSDNRHESTENQKLKASEHKLLSTEAETKKEGNSIKPAKTKSKK
ADEHVLTDTRVKYLKDQLIRGRLYLSLSATRTNTQFIKELRLRMKELQRALGDATKDADL
PKNANEKLKAMEQTLAKGKQIQDDCTAVVKKLRAIIHSTEEQLRVHKKQALFLTHLTAKT
VPKGLHCLPLRLSTEYYSLNSSAQQFPNQQNLHDPNLFHYALFSDNVLATAVVVNSTVSN
AKDPSKHVFHIVTDRLNYAAMRMWFLANPAGEATIQVENIEEFTWLNASYSPVLKQLGSQ
NMIDYYFKTRKSESDSNLKFRNPKYLSIMNHLRFYLAEIFPKLSKVVFLDDDIVVQKDLS
GLWSIDLKGKVIGAVETCGENFHRFDRYLNFSNPLIAKNFDPRACGWAYGMNVFDLEEWR
KQNITQVYHSWQKLNNERQLWKLGTLPPGLITFWKRVYPLERTWHVLGLGYNPSVSQREI
EKAAVIHYNGNLKPWLEIGIPKFRGYWNRFVDYDQAYMRDCNMSP
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgagtatgaagacatggatgagaaaaccagtactagtgttgctttttgtaacg
gttcttgcccccattgttctttacaccgatagactcgctacattttcttccttttctata
gatgaatacgtttcggagccttcaacactttcgctgaatcgtgatgtcaggtcccgaaat
ttacttcctcaggagttatctgcagcaaaagaagagacagcgagtgatgtttatttggga
aaatcgactagatctattcaacttcttgatggtgaaaggtccaggaaaactagacagctt
aatgaagcatacgatttaaatgccactttcaacactcatacttcagaatcgaaggaacat
gacgcaattgtcatcaggcaagtgacacaaggatttcacgaagctgatcacagtgacaac
agacatgaatcgactgaaaaccagaagttgaaggcgtctgagcataaattgttatccact
gaagctgaaaccaaaaaagagggaaattccatcaaacctgcaaaaaccaaaagcaagaaa
gcagatgaacatgttttaacagatacccgtgttaagtatctgaaggatcagttgattagg
ggaagactttatctttccctttcagcaacaaggacaaatactcaatttattaaggaactt
cggttacgtatgaaggaactccaaagagcacttggtgatgcaaccaaggatgcagatcta
ccaaagaatgcgaatgagaagctgaaagcaatggagcagacactggcaaaagggaagcaa
atacaggatgactgcactgctgttgtgaagaaactgcgtgccattattcactctacagaa
gaacaactgcgggtccacaagaaacaggccttgtttctgactcatttaactgccaaaact
gttccaaaaggtctccattgtcttcccttacgcctttccacagaatactattctcttaat
tcttctgctcaacaattcccaaatcaacaaaacctacatgaccctaacctcttccactat
gcattgttttcggataatgtgttggctactgctgtagttgttaactcaaccgtttccaat
gcaaaggatccatcaaaacatgtgttccacattgtgacggataggctgaattacgcagca
atgagaatgtggtttcttgcaaatccagctggtgaggccacaatacaagttgaaaacatc
gaggaattcacatggctgaatgcaagttatagccctgtcttaaagcagttgggttcacag
aacatgattgattattatttcaagacacgcaaatcggagtccgattcaaatctcaagttc
aggaacccaaagtatctgtcaatcatgaatcatctccgattttaccttgcagagatattc
ccaaagcttagtaaagtggtgttcttggatgatgatattgttgtccaaaaggatttgagt
ggtctttggtccattgatttgaaagggaaggtgattggtgctgttgagacgtgtggggag
aacttccatcgctttgatcgatacctcaacttctcaaatcctctgattgctaaaaacttc
gatccacgtgcgtgtggatgggcgtatggaatgaatgtatttgatttggaggaatggagg
aagcaaaacatcactcaggtttatcattcgtggcaaaagttgaacaatgagagacaactt
tggaagctggggacgctgccacctggcttgataacgttttggaaacgggtatacccgttg
gagaggacatggcatgtacttgggcttgggtataacccgagtgtgagtcaaagggagatt
gaaaaagcagctgtgattcattacaatgggaatctgaagccgtggctggaaatagggatt
ccaaagtttcgagggtattggaatcggtttgtggactatgatcaggcttacatgagggac
tgcaatatgagcccataa
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