Lactuca sativa (garden lettuce): 111886179
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Entry
111886179 CDS
T05352
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00520
Amino sugar and nucleotide sugar metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111886179
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsv01003
]
111886179
Enzymes [BR:
lsv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
111886179
Glycosyltransferases [BR:
lsv01003
]
Polysaccharide
Structural polysaccharide
111886179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
HTH_Tnp_2
DUF948
Motif
Other DBs
NCBI-GeneID:
111886179
NCBI-ProteinID:
XP_023738175
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All DBs
Position
4:complement(106336938..106340532)
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AA seq
621 aa
AA seq
DB search
MSSIGRGKMKMRLRKAVLVLLFLTVVAPIALYTDRLATFSSFSTYEFLQEPSTLSLQRDV
RPLNLHPQELSASQEPFDDVYLDNLARSIQHPDGERSRKTRKLNEESKGQNDNPIRQVVT
LEELAENKENGKLKATQTETKKEGNSIKPAKTKSKKADEHVLTDTRVKYLKDQLIRGRLY
LSLSATRTNTQFIKELRLRMKELQRALGDATKDADLPKNANEKLKAMEQTLAKGKQIQDD
CTAVVKKLRAIIHSTEEQLRVHKKQALFLTHLTAKTVPKGLHCLPLRLSTEYYSLNSSAQ
QFPNQQNLHDPNLFHYALFSDNVLATAVVVNSTVSNAKDPSKHVFHIVTDRLNYAAMRMW
FLANPAGEATIQVENIEEFTWLNASYSPVLKQLGSQNMIDYYFKTRKSESDSNLKFRNPK
YLSIMNHLRFYLAEIFPKLSKVVFLDDDIVVQKDLSGLWSIDLKGKVIGAVETCGENFHR
FDRYLNFSNPLIAKNFDPRACGWAYGMNVFDLEEWRKQNITQVYHSWQKLNNERQLWKLG
TLPPGLITFWKRVYPLERTWHVLGLGYNPSVSQREIEKAAVIHYNGNLKPWLEIGIPKFR
GYWNRFLDYDQAYMRDCNMSP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctattggaagaggaaagatgaagatgcggctgagaaaggcagtgctagtgttg
ctttttctgacagttgttgcccccattgcgctttacaccgacagactcgctacattttct
tcattttctacatatgaattccttcaggagccttcaacactgtcattgcaacgagatgtc
aggcccctaaatttgcatcctcaggagttatctgcatcacaagaaccatttgatgatgtt
tatttggacaatttggctagatctattcaacatcctgatggtgaaagatccaggaaaact
agaaagcttaatgaagaatccaaaggacaaaatgacaaccccatcaggcaagtagtgacg
cttgaagaattggctgaaaacaaggaaaatggcaagttgaaagcgactcaaacagaaacc
aaaaaagagggaaattccatcaaacctgcaaaaaccaaaagcaagaaagcagatgaacat
gttttaacagatacccgtgttaagtatctgaaggatcagttgattaggggaagactttat
ctttccctttcagcaacaaggacaaatactcaatttattaaggaacttcggttacgtatg
aaggaactccaaagagcacttggtgatgcaaccaaggatgcagatctaccaaagaatgcg
aatgagaagctgaaagcaatggagcagacactggcaaaagggaagcaaatacaggatgac
tgcactgctgttgtgaagaaactgcgtgccattattcactctacagaagaacaactgcgg
gtccacaagaaacaggccttgtttctgactcatttaactgccaaaactgttccaaaaggt
ctccattgtcttcccttacgcctttccacagaatactattctcttaattcttctgctcaa
caattcccaaatcaacaaaacctacatgaccctaacctcttccactatgcattgttttcg
gataatgtgttggctactgctgtagttgttaactcaaccgtttccaatgcaaaggatcct
tcaaaacatgtgttccacattgtgacagatagactcaattacgcagcaatgagaatgtgg
tttcttgcaaatccagctggcgaggccacaatacaagttgaaaacatcgaggaattcaca
tggttgaatgcaagttatagccctgttttgaagcagttgggttcacagaacatgatcgat
tattacttcaaaacacgaaaatcggagtccgattcaaatctcaagttcaggaacccaaag
tatctgtcgatcatgaatcatcttcggttttaccttgcggagatattcccaaagcttagt
aaagtggtgttcttggatgatgatattgttgtccaaaaggatttgagtggtctttggtcc
attgatttgaaagggaaggtgattggtgctgttgagacgtgtggggagaacttccatcgc
tttgatcgatacctcaacttctcaaatcctctgattgctaaaaacttcgatccacgtgcg
tgtggatgggcgtatggaatgaatgtatttgatttggaggaatggaggaagcaaaacatc
actcaggtttatcattcgtggcaaaagttgaacaatgagagacaactttggaagctgggg
acgctgccacctggcttgataacgttttggaaacgggtatacccgttggagaggacatgg
catgtacttgggcttgggtataacccgagtgtgagtcaaagggagattgaaaaagcagct
gtcattcactataacgggaatctgaagccgtggctggaaatagggattccaaagtttcga
gggtattggaataggtttctggactatgatcaggcttacatgcgcgattgcaatatgagc
ccatga
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