Lactuca sativa (garden lettuce): 111886223
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Entry
111886223 CDS
T05352
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111886223
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111886223
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111886223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf_RING_Vps8
zinc_ribbon_16
zf-C3H2C3
zf-RING_Vps41
Prok-RING_4
Prok-RING_1
PHD
zf-Nse
VPS18_RING_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
111886223
NCBI-ProteinID:
XP_023738227
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Position
4:108006280..108009008
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AA seq
308 aa
AA seq
DB search
MDNSKDQGSKIANTDENPSSNTQSPVDSSLIPAATVENGNPNRPSAAPRTPFTNLSQVDA
DLALARTLQDQERAYMMLRMNGDGSDHESWETGSYVHDDDDEFDHHNSEYEGSEANEEEE
DAFDVHAHLDLGSGEEDRGNHGVELDPASFPDDESYARALQDAEDQEMAARLLALTGIHE
MVTEEDDDIDDHGGNSQGTWDDVDPDELSYEELLALGEVVGTESRGLSADSISSLRSVVY
KIQNNQNGSSDTCVICRLDYEDGENLILLSCKHSYHSECITNWLQINKVCPVCSTEVSTS
SGTGTTGC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacaactccaaagaccaaggcagcaagatcgccaacaccgatgaaaaccctagcagc
aatactcaatcacctgttgattcttcccttattcctgctgccactgtagaaaatggcaat
ccaaaccgcccttctgcggctcctagaactccctttaccaatctaagtcaggtcgatgct
gatcttgccctcgctcgtacactacaagaccaggaaagggcatatatgatgttgagaatg
aatggcgatgggagtgaccatgagagttgggaaacaggaagttatgtgcatgatgatgat
gatgaatttgatcatcacaacagtgaatacgagggttctgaagccaatgaggaagaagaa
gatgcatttgatgtccatgctcatcttgatcttggatctggagaggaggatagaggtaac
cacggtgttgaattagatcctgcttctttcccagatgatgagtcatatgcaagagcttta
caagatgctgaagatcaagaaatggctgctagattattggccctcactggcatacatgaa
atggttacagaggaagatgatgatattgatgatcacggtggtaattctcagggtacatgg
gatgatgttgacccagatgaactatcatatgaggaattacttgcacttggtgaagtggtg
gggacagaaagcagagggctctctgctgattcaatttcttctttgcgctcagtagtatac
aagatccagaataatcaaaacggaagcagtgatacatgtgttatttgtcggttagattat
gaagatggggaaaacttgatcttgctgtcttgtaaacactcttaccattctgaatgcata
accaactggttacaaatcaacaaggtgtgccctgtttgcagcacggaggtgtcaacatca
tccggaactggaaccacaggctgttga
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