Lactuca sativa (garden lettuce): 111886265
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Entry
111886265 CDS
T05352
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111886265
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111886265
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
zf-met
Motif
Other DBs
NCBI-GeneID:
111886265
NCBI-ProteinID:
XP_023738274
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Position
4:complement(108679120..108683005)
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AA seq
463 aa
AA seq
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MLEKLVAEETIIPNGFTHNNNLRLPSSNPPIIKKKRNLPGTPDPEAEVIALSPKTLMATN
RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHNHPSRALG
DLTGIKKHFCRKHGEKKWKCAKCSKCYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFI
THRAFCDALAEETARVTAASHFNNATPAGSLGNINYHFVGPPVLAGPTMAQHLSSIFKPI
SSNPQNHLDPTQQGELSLWASGSDNINNENNKHNNLQDMHQIDSVLYADPHQNHNPQSEY
HSDWGVFGMKTTSDHEVNVSAPSLFSSQSISHQTHPTASMSATALLQRAAQMGSTSSATA
NQSAFLGSFGLKSSNNCTTMVSATAPTQVQEENRFCGLYGTSTMMKNCNGSDLENEFSNL
EQMYPPSKRRHIQIEEHHGGQTRDFLGVGIQPMCHPRMRFDHV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaagcttgtagcagaagaaaccataatccccaatggtttcacacacaacaac
aatcttcgactaccttcctccaatcctcccatcatcaagaagaaaagaaacctcccagga
accccagatcctgaagcagaggttatcgcgttgtcacccaagactctgatggcaacaaat
agattcttgtgtgagatttgtggaaagggatttcaaagggatcaaaaccttcagcttcat
cggcgaggtcataacctgccatggaaactgaagcaaagaacaagcaaagaagttcgaaaa
cgagtttacgtgtgcccggagaagtcgtgtgtccataaccatccgtcaagggcacttgga
gaccttactggtatcaagaaacatttctgcaggaagcatggcgagaagaagtggaagtgt
gccaagtgctctaagtgttatgcagttcagtcggattggaaagctcattccaaaacctgt
gggacaagagaatacaagtgtgattgcggcactcttttttcaaggagagacagctttatc
actcatagggcgttttgtgacgccttggcggaggaaactgcaagggttacagcagcatct
cacttcaacaatgcaacaccagcaggatcacttggaaacataaactaccattttgtagga
ccaccggttctcgctggtccaaccatggctcaacacttgtcttccatctttaagcccatc
tcatctaacccccaaaaccatcttgacccgacacaacaaggtgaactttcactatgggcc
agtggtagcgacaatattaataacgaaaacaataagcataataatctccaggacatgcat
caaatcgactcggttttatatgctgatcctcatcaaaaccacaatccacaatccgaatat
cactccgattggggtgtgtttggaatgaaaaccacttcagatcacgaggttaatgtaagt
gcaccttctttgttcagctcacaaagcatctcgcaccaaacacacccgacggcaagcatg
tctgcaactgctttgttgcagagagctgctcaaatggggtcgacctcctctgctacggcc
aaccaatctgctttccttggaagcttcggattgaaatccagcaacaattgtactacaatg
gtttcagctactgctcctactcaagttcaagaagagaacagattttgtgggttgtacggt
actagtaccatgatgaaaaactgtaatggaagtgatttggagaacgagttttccaatttg
gagcagatgtaccctccctctaaaagaaggcacatacagattgaagaacatcatgggggg
caaactagggatttccttggtgtaggtattcaacccatgtgccatcctaggatgagattt
gatcatgtgtaa
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