Lactuca sativa (garden lettuce): 111886465
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Entry
111886465 CDS
T05352
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111886465
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111886465
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111886465
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111886465
03041 Spliceosome [BR:
lsv03041
]
111886465
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111886465
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
111886465
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111886465
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111886465
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111886465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
111886465
NCBI-ProteinID:
XP_023738474
LinkDB
All DBs
Position
3:complement(12948203..12950390)
Genome browser
AA seq
322 aa
AA seq
DB search
MEEAVLDKFIKKLLAAKVGSVPKQFPFSESEIRKLCLASREVFLSQPNLLELKAPIKICG
DIHGQYADLLQLFDHGGHPPNSNYLFLGDYVDRGKHSLETICLLLAYKIKYKDNVFLLRG
NHECASINRIYGFYDECKRRINVRVWKMFSECFKCLPVAAVVEEKILCMHGGLSPELKKL
DQIRGIPRPIDVPEQGLLCDLLWADPDKDVKGWGPNERGVSYTFGADKLTEFLHKHDLDL
VCRAHQVVEDGYEFFADRQLVTLFSAPNYCNEFDNDGAMMNVDEKLTCSFQIIKASLKKG
RVGFGKFKLPPATPPHKVKTAP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcagtcctcgacaagtttatcaagaagctgttagcggctaaggttggatcc
gttccgaagcagtttcccttctcggaatcggagattcgtaagctttgtttggcttcgaga
gaggttttccttagccagcctaatttgctcgaacttaaagccccgattaagatctgtggt
gacatccatggacaatatgccgatctcctccagctgtttgaccatggagggcacccaccc
aactcaaattacttatttctgggtgactatgttgatcgtggtaagcatagccttgaaaca
atctgccttctgcttgcatacaagataaaatacaaggacaacgtctttcttctccgggga
aaccatgaatgtgcttccatcaatcgtatatatggtttctatgatgaatgcaagaggaga
atcaacgtccgtgtttggaagatgttttctgagtgcttcaagtgtctacctgttgctgcg
gttgttgaagaaaagatactttgcatgcatggaggattgtctccggagctgaagaagttg
gatcagattcggggcatacctcgccccattgatgtccccgaacaagggctgctatgtgat
ttactgtgggctgatcctgataaagatgtgaaaggatgggggccgaatgaaaggggtgtg
tcgtatacttttggtgctgataaacttacagaatttctccacaagcacgatctcgacctt
gtctgccgtgctcatcaggttgttgaagatgggtatgagttttttgcggacaggcagcta
gtaaccttgttttccgcaccaaattactgtaatgagtttgataatgatggtgcgatgatg
aatgtcgatgaaaagttaacttgttcgtttcagattataaaggcttctttgaagaaaggg
agggttggttttggaaaatttaagttaccaccagcaacacccccacacaaagtaaagacg
gctccttag
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