Lactuca sativa (garden lettuce): 111886589
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Entry
111886589 CDS
T05352
Name
(RefSeq) two-component response regulator ORR22
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111886589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111886589
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
111886589
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
111886589
NCBI-ProteinID:
XP_023738605
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Position
5:complement(225286003..225289130)
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AA seq
587 aa
AA seq
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MTVEEIRGSNEIDRFPIGMRVLAVDDDPTCLKLLDGLLRKCQYQVTTTSQAITALKMLRE
NRNRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSGNSDPKLVMKGITHGACDYLVK
PVRLEELRNIWQHVIRRKVESKSQSKSDNQDRQNHGGEGGQEAGSGDLNGKLNRKRKDED
DDGEDNGNEDDDPSSQKKPRVVWSIDLHRKFVAAVNQLGIEKAVPKRILDLMNVEGLTRE
NVASHLQKYRLYLKRISQQANMVVAFGGSKDASSYMRMSSLEGLGDFRTLSASGRLPGPT
LSSYSPSGMLGRLNSATGMTLHSLTSPSIIQPTHTQNLTHSINSLNKFQPVVLPTPQTQT
HQNTNLFQSPFDLTHHKPNNNTQIPDFTPIDESRIFTGSLKMGSMSSESFNLVSSSSTFL
DVPIPPPIGDTFHDQLPPNGGLKYGYTAGFGSSNITTTASVPLEVQSQRQGQYGKQNYGQ
YSSNGFSTLSASAPPLSGGCLGGNGALTTAPAMQHNRGSERSSTELKMGPGQEYLLEHSK
ILNGFVANNGYDSLDDLMNGMMKREQDPTIIMDGEYGFDPYSFGSCI
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagaagaaattagagggtctaacgaaattgacagatttcccattgggatgaga
gttcttgctgtcgatgatgatccaacttgtttgaagttattagatgggcttttaaggaaa
tgccaataccaagttacaaccacaagtcaagccataacagcattgaagatgttaagagaa
aatcgaaaccgatttgaccttgtgatcagtgatgttcatatgccggacatggatggtttc
aagcttcttgaactcgttggtcttgaaatggacttacccgttatcatgttatcgggaaac
agcgacccgaagcttgtaatgaaggggataacacatggggcttgtgattaccttgtgaaa
ccggttcgtttggaggaattacgtaatatatggcaacatgtgattcgtagaaaagtggag
tcaaaatctcaatcgaaatctgacaaccaagatcggcagaatcatggaggtgaaggtgga
caggaagccggaagtggagatctgaatgggaaacttaatcggaaaagaaaagatgaggat
gacgatggtgaagataatgggaatgaagatgacgatccatcttcgcagaagaagccacgt
gttgtttggtctattgatcttcatagaaagttcgttgctgctgttaatcaacttggaatc
gagaaagctgttcctaaaaggatccttgatttgatgaatgtcgaaggtcttactagggaa
aatgtagcaagccatctccagaaatatcggctttacttgaaacggataagtcaacaagct
aacatggtggtggcatttgggggaagcaaagacgcgtcatcttacatgcgaatgagctca
ctggaaggactcggtgatttccggacactatcagcttccggaagattaccgggacccaca
ttatcatcgtattcaccttccggaatgctcggaagactcaatagtgcaactggaatgaca
ctccatagcctcacttcaccttctataatccaaccaacccacacccaaaacttaacccat
tccatcaattccctcaacaaatttcaacccgttgtgttaccaacaccacaaactcaaaca
caccaaaacacaaatctttttcaatccccatttgatcttactcatcataaaccaaataat
aacacccaaatcccagatttcactccaattgatgaatctagaatctttactggttcttta
aagatgggttccatgagttcagaatctttcaaccttgtttcaagtagttccacctttctt
gatgtcccaatcccaccaccaattggggatactttccatgaccaattgccacctaatggc
ggcctgaaatatggttacactgctggatttggttcgagtaatattaccaccacggcctcg
gtgccgcttgaagttcaaagccaaaggcaggggcagtatgggaaacagaattatgggcag
tattcgagtaatggttttagcacgttatccgcctcggcaccaccactaagtggtggttgt
ttgggcggcaatggtgcactgacgacagctccggctatgcaacataacagagggagtgag
aggtcaagtactgaactgaaaatgggacccggtcaagagtatttattggagcattcgaag
atactgaatggttttgttgcaaataatggttatgactctttggatgatcttatgaatgga
atgatgaaaagggagcaggacccgacaatcataatggatggagaatatggatttgatcct
tattctttcggttcatgtatatga
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