KEGG   Lactuca sativa (garden lettuce): 111886635
Entry
111886635         CDS       T05352                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04144  Endocytosis
lsv04145  Phagosome
lsv04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111886635
   04145 Phagosome
    111886635
   04148 Efferocytosis
    111886635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111886635
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111886635
   04031 GTP-binding proteins [BR:lsv04031]
    111886635
Membrane trafficking [BR:lsv04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    111886635
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111886635
  Exosomal proteins of other body fluids (saliva and urine)
   111886635
  Exosomal proteins of colorectal cancer cells
   111886635
  Exosomal proteins of bladder cancer cells
   111886635
GTP-binding proteins [BR:lsv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    111886635
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 ATP_bind_1 RsgA_GTPase AAA_16 cobW nSTAND3 AAA_7 Septin Podovirus_Gp16 PduV-EutP AAA_24 AAA_22 NACHT nSTAND1 NTPase_1 IIGP
Other DBs
NCBI-GeneID: 111886635
NCBI-ProteinID: XP_023738660
LinkDB
Position
4:complement(289745205..289747333)
AA seq 209 aa
MLMSDRMLLKVIVLGDSGVGKTSLMNRYVYNRFNKQYKSTIGADFVTKELHIDEKLVTLQ
IWDTAGQERFHSLGVAFYRGADCCVLVYDVNIQKTFETLQTWHEEFLKQADPTNPERFPF
VLLGNKVDTDGGSSRAVSEKTAREWCAMNGNIPYFETSAKENYNVDDAFLCVAKTAIASE
HEHPDVNEMYFERIPTTISETEQERSCAC
NT seq 630 nt   +upstreamnt  +downstreamnt
atgttgatgtctgatcggatgttgctcaaggtcattgttcttggtgatagtggggttggg
aagacatctttgatgaatcgatacgtttataacaggttcaacaaacagtacaagtcgaca
attggtgccgattttgtgacgaaagagttgcatattgacgagaagctcgtcacgttgcaa
atttgggacacagctggtcaagagaggtttcatagccttggagttgcattttatagaggg
gctgattgttgtgttcttgtttacgatgtcaacattcagaaaacctttgaaacccttcaa
acatggcatgaagagtttctaaaacaggcagatccaactaaccctgaaagattcccgttc
gtgttgcttgggaacaaagtggacactgacggtggtagcagtcgagccgtttctgagaag
acagcaagagagtggtgtgccatgaacggaaacataccttactttgagacatcagcgaaa
gagaattacaatgtggatgatgcattcctttgtgtggcaaaaacagctattgcaagtgaa
catgaacaccctgatgtgaatgaaatgtattttgaaaggatccccacgacaatttctgaa
actgagcaagaaagaagttgtgcctgctga

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