Lactuca sativa (garden lettuce): 111886648
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Entry
111886648 CDS
T05352
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
111886648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsv03051
]
111886648
Proteasome [BR:
lsv03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
111886648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_lid_3
AAA_2
AAA_22
DUF815
RuvB_N
nSTAND3
AAA_28
NPHP3_N
TIP49
Sigma54_activat
AAA_14
RNA_helicase
Mg_chelatase
TsaE
IstB_IS21
AAA_7
Parvo_NS1
AAA_18
AAA_30
NTPase_1
AAA_24
NACHT
AAA_3
AAA_25
ATPase_2
NB-ARC
DUF3450
DUF5906
AAA_33
AAA_11
ABC_tran
ATPase
Viral_Hsp90
DUF6570
AAA_19
AAA_17
Motif
Other DBs
NCBI-GeneID:
111886648
NCBI-ProteinID:
XP_023738671
LinkDB
All DBs
Position
8:155925801..155929451
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AA seq
416 aa
AA seq
DB search
MAATMVLDPKPTSLSPPPTLPTPYSTIDTVIADSEDDLYTRLKSLERQIEFIEIQEEYVK
DEQKNLKRELLRSQEEVKRIQSVPLVIGQFMEMIDQNNGIVGSTTGSNYYVRILSTINRE
LLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYSDIGGCDIQKQEIREAVE
LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGE
GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT
VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLED
YVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFDFYK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacgatggttcttgaccctaaaccaacatcattgtcaccaccaccaaccctc
cccacgccctattccaccatcgacaccgttatcgccgactccgaagacgatctctacact
cgcctcaaatccctagagcgccaaatcgagttcatcgaaatccaagaagaatatgtgaaa
gatgagcagaaaaacctcaagcgcgaactgctgaggtcgcaagaggaggtaaagcggatc
caatcggtgccgctcgtgattgggcagttcatggagatgatagatcagaataatggaatc
gtcggctccactacgggctctaattactatgttagaattttgagtaccatcaatcgtgag
ctattgaaaccctctgcttccgtcgctttgcaccgccattctaatgctctcgttgatgtg
ttgccaccggaggctgactcgagtatttcgcttcttagccagtctgagaaaccagatgtc
acatatagcgatattggaggctgtgacattcaaaagcaggaaatacgtgaagcagttgag
ttgcctttgactcaccatgaattgtacaaacagataggaatagaccctccacgtggcgtt
ttgctctatggtccacctggcactggtaaaaccatgcttgcaaaagctgtggcaaatcac
actacagcagcctttatcagagtagttggctcagaatttgtccagaagtatttgggagag
ggcccaaggatggttcgtgatgtgtttcgtcttgctaaagaaaacgcacctgcaattata
tttatcgatgaagttgatgcaatagctactgctagatttgatgctcagactggagctgat
agagaagtccaaagaattctaatggaacttttaaatcagatggatgggtttgaccaaaca
gtgaatgtgaaggtgataatggcaactaacagagcggatactttggaccctgcacttctt
cgtccgggaagacttgaccgcaagatcgagttccctttaccagatagacgacaaaagagg
cttgtttttcaggtttgcactgctaaaatgaatctgagtgatgaagttgacttggaagat
tatgtttctcgacccgacaaaatcagtgctgctgagataacagcaatttgtcaagaagcg
ggtatgcatgcggtgcgcaagaacaggtatgtaattctaccaaaggactttgagaagggg
tacaggaccaatgtgaagaagcccgacaccgactttgatttctacaagtaa
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