Lactuca sativa (garden lettuce): 111886724
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Entry
111886724 CDS
T05352
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111886724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111886724
03036 Chromosome and associated proteins [BR:
lsv03036
]
111886724
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
111886724
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
111886724
RSF complex
111886724
WICH complex
111886724
B-WICH complex
111886724
NORC complex
111886724
BRF complex
111886724
NuRF complex (fruit fly)
111886724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
111886724
NCBI-ProteinID:
XP_023738739
LinkDB
All DBs
Position
5:134527184..134534948
Genome browser
AA seq
1069 aa
AA seq
DB search
MARRSKSKDSTEESLSNSSEEEQVNDQEEEDEEELEAVARPVDSDEDENATPAVDATGEE
QDDEEEDEQDDNDEANNEISHREKARLKEMQRLKRQKIQDILDQQNATIEADMNSKGKGR
LKFLLQQTELFAHFAKSDASASQKKGKGKERGRHASKLTEEEEDEEYLKEEEAGAGHTRL
LVQPSCITGKMRDYQLAGLNWMIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIT
GPHMVVAPKSTLGNWMNEIKRFCPILRAVKFLGNPDERKYIREELLVAGKFDVCVTSFEM
AIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWA
LLNFLLPEIFSSAETFDEWFQISGENDQEEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKE
TILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPP
YTTGDHLVTNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDG
NTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQD
RAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQM
VRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTADLYDF
DDDKDENKVDFKKIVSDNWVEPPKRERKRNYSESEYFKQTMRQSGPARPKEPRIPRMPQL
HDFQFFNTQRLSELYEKEVRYLMVQAQQKNQVKDSIEVDEPEVEVGDPLTAEEQEEKEKL
LEEGFSTWSRRDFNTFIRACEKYGRSDVGSIASEMEGKSEEEVERYAAVFKERYKELNDY
DRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMIC
MVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEYDERER
QARKEKKLSKNSTPSKRAIARQTESPPSTIKKRKQSSMDDYVNSGKKGK
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgctccaaatcgaaggactccacggaggaatctctgtctaattcgtcagag
gaggagcaggtcaatgaccaggaggaagaagacgaggaggaactggaagccgttgcacga
cctgttgattctgacgaagatgaaaacgccacacccgcggttgacgccaccggtgaggag
caagacgatgaggaagaagacgagcaggatgacaatgatgaggccaacaatgaaattagt
catcgtgaaaaggcaaggttaaaggagatgcagaggttgaagagacaaaagatacaagac
atacttgatcaacaaaatgctactattgaggctgatatgaatagcaagggaaagggaaga
ttgaagttcttactgcagcaaacagaactatttgctcattttgccaaaagtgatgcatct
gcttctcagaaaaagggaaagggaaaggaaaggggtcgtcatgcttcaaagttgactgaa
gaagaagaggatgaagagtatctcaaagaggaagaagctggagcaggacatacacgtttg
ttggtgcagccctcttgtataacagggaagatgagagattatcaacttgctgggttaaat
tggatgataagactatatgagaatggtataaatggaattcttgcagatgagatgggactt
ggaaaaactctacaaaccatctcattacttggttatttgcatgaatttagaggaataact
ggaccccacatggttgtggctcctaagtctacacttggtaactggatgaatgaaattaaa
cgtttttgcccaatattgcgtgctgtaaagtttcttggtaatccagacgaaaggaaatac
atacgtgaagagctacttgttgctggaaagtttgatgtatgtgtcaccagttttgaaatg
gctattaaagagaagactaccttacgtcgatttagctggcgttatatcataattgatgaa
gctcatagaattaagaatgaaaattctcttctttcaaagaccatgagaatttacaatacc
aattatcgtctccttatcactggcacaccacttcagaacaaccttcatgagctttgggca
ctgctgaactttttgctacctgagatttttagttctgctgaaacctttgatgagtggttt
caaatttctggtgaaaatgatcaggaagaggttgttcaacagcttcacaaggtgctaaga
ccttttcttctaagaagattgaagtcagatgttgagaaaggtttacctcctaaaaaagaa
accattctcaaggttggaatgtctcaaatgcaaaaacagtattacaaggccttactgcag
aaagatcttgaggttgtgaatgctggaggtgagagaaagcgtctgttaaatattgcaatg
cagctcagaaaatgctgcaatcatccatatctgtttcaaggagctgaacctggtcctcct
tatactactggcgaccatcttgtaacaaatgcaggaaaaatggtgcttctagacaagttg
cttccaaaattgaaggaacgtgattcaagggtgttgatattctcacagatgacaaggctg
ctggacattctagaagattacttgatgtttcgtggatatttatactgtcgtattgatgga
aacactggaggtgaagatcgtgatgcctccattgatgcttttaataagccaggaagtgaa
aagtttgtgtttttattatcaacaagagctggaggtcttggtattaatcttgccactgca
gatatagtcattttgtatgacagtgactggaatccacaagtggatttgcaagctcaggat
cgtgctcatagaattgggcagaagaaagaagttcaagtgttccgattttgcactgagtac
actatagaggagaaagtcattgaaagagcttataaaaagcttgcacttgatgctttggtt
attcaacaaggacgtttagcagagcaaaagactgtaaacaaagatgagctgctacaaatg
gttaggtttggtgctgaaatggtattcagttcaaaggacagcacaatcacagatgaagat
attgacagaatcattgctaagggagaagaggcaactgctgaacttgatgccaagatgaaa
aagttcacagaagatgcaatcaagttcaaaatggacgacactgctgatttgtatgatttt
gatgatgacaaggatgagaacaaggttgactttaagaagattgtgagtgataattgggtg
gagcctccaaaaagagagaggaagcgcaactactcagaatcagaatacttcaagcaaaca
atgcgccaaagtggtcctgcaaggccaaaggagcctaggattcctcgcatgccacaattg
catgacttccagttctttaacactcagaggctaagtgagctctatgagaaagaagtgcgg
tatctcatggtgcaggcacagcagaagaatcaagtgaaagactccatagaagttgatgag
ccagaagtagaggtgggagatcctttgactgctgaagagcaagaagaaaaagagaaacta
ctggaagaaggattctcaacatggagtaggagagacttcaatactttcattagggcttgt
gagaagtatggtaggagtgatgtgggtagtattgcttctgaaatggaaggcaaatcagaa
gaggaagttgaaagatacgctgcagtgtttaaggaaagatacaaggaactgaatgattat
gatagaataattaagaatattgaaagaggggaggctagaatttctcgtaaagatgaaata
atgaaagcaattggaaagaaattagaccgttacaaaaatccttggctggagctcaaaatc
caatacggtcagaacaaaggcaagctctacaatgaggaatgtgatcggttcatgatttgc
atggttcacaaacttgggtatggaaactgggacgaattgaaggctgcatttagaacatca
cctttgttcagatttgattggtttgttaagtcacgaaccactcaagaacttgcaaggaga
tgtgatactctcattcgattggtggagagggaaaatcaagagtatgatgagagagagaga
caggctcgtaaagaaaagaaactttccaagaactcaacgccatcaaagcgggccatagca
aggcaaacagagagtccaccttctactataaagaagcgaaagcaatcatcaatggatgac
tatgttaactcgggaaagaagggcaaatga
DBGET
integrated database retrieval system
