Lactuca sativa (garden lettuce): 111886795
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Entry
111886795 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111886795
KO
K17925
sorting nexin-13
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsv04990
]
111886795
Domain-containing proteins not elsewhere classified [BR:
lsv04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
111886795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
111886795
NCBI-ProteinID:
XP_023738812
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All DBs
Position
4:185967279..185972664
Genome browser
AA seq
1065 aa
AA seq
DB search
MSTGRQMVTARDLIDEAKKRIVFLSMCVIGLSYLMSLTSASVLINLPAALSLLIVLRYFT
LDYDMKRKAASYNKNPSTTHVFSVKKPPLDPKSISGKSDWRKKVNSPVVEDAIDQFTKHI
VSEWVTDLWYSRITPDKQGPDELVLIINGVFGEFSSRMRNINLIDLLTRDIIKLLCTHLE
LFRACQIKIMKQEPLTIAQRDIELKTVLYAENKLHPALFSSVAEYKVLQHLMDGFISLTF
RPEDLNCSLFRYIVREMLACAVIRPVINLANPRFINERIENVVQNSSRKPEKVSNNTEQV
NSQSKPNGSVKVYTQSVSLDPSAKGVELTLLKKDNYDSATNNPTIKDPLLSIDTKVDTRK
QHVSGEWGDKLDIVTRKKTEALAPENFENMWAKGRNYKTKDGMIIQQSSSATSANVVNQS
KALTSQEVKHGSTKGDNKSFLYDEEEDEEDETRSNSSVYSSEDEESGDITGLNSPGTKVW
DGKSNRKQTVTHIHHPLESFHGQKVKKTGKGASPKRNPGRKRSRVSNINNQKEEIWHEVE
RKSFLLGDMQDVLSSSKGYSKSVESSDESDKDSLARTNSGTSVSSLFPSIPESNMSSSTN
AQKHSQLDDSFFRLRCEVLGANIVKSGSKTFAVYPISVTDVNNVSWSIKRRFRHFEELHR
RLKEYPEYNLHLPPKHFLSTGLDVPVIQERCKLLDIYLKRLMQLPTISGSIEVWDFLSVD
SQTYSFSNSISIIQTLSGEKSRDARFVGDPSRREVLVSDAVMKNSSSSEAKNNSINDGSK
IYKKNAGFSVAKPEVVKVIGKALEDSDSDHEIVASSHIIKKSEEESLKGLEDNIVNPASG
IGILTDDGVSEFPSEWVPPNLSVPILDLVDVVFQLQDGGWIRRKAFWVAKQVLQLGMSDA
FDDWLIAKVQLLRKGSIVASGIKKLEQILWPDGIFLTKHPRRQQPPPATVKPPQDSHDRQ
PPPPPPTNEQTLTHEEAQEQEAQRRSKLVYELMIDKAPAAVVSVFGRKEYEQCAKDVYYF
IQSSVCLKLLAYDLIELLLMSAFPELDSVFQQLHEEKQKFGALEH
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgagcactggcaggcaaatggtgactgctcgagaccttatcgatgaggccaagaaacgg
attgttttcctgtccatgtgcgttattggactctcgtatctcatgtctctgacaagcgct
tcagtgttaataaacttgccagctgcattatccttacttattgttcttcgctacttcaca
ttggattatgacatgaagagaaaagctgcatcatataacaaaaacccatcaacaacccat
gttttttctgtcaaaaaaccacccctagaccctaaatccatctcaggaaagtcagactgg
agaaaaaaagtcaactctccagttgttgaagatgcaatagatcaattcacaaaacacata
gtttcagaatgggtgactgatctttggtattcccgtattacccctgacaaacaaggtcca
gatgaactagtgctcattatcaatggtgtttttggggagttctctagccgaatgagaaat
atcaacctcattgaccttctcacaagggacattatcaaacttttatgcacccatttggag
ctttttcgtgcatgtcaaatcaagattatgaagcaagaacctctcacaattgcacaaaga
gacatagaactaaaaactgtgctttatgctgaaaataagttgcatcctgctttattttct
tctgtagctgagtacaaggttctacagcatcttatggatggtttcatatctttaacattc
agacctgaggatctgaattgttctttatttcgttacatagtgagggaaatgcttgcttgt
gcagtaatacgacccgttataaatttagcaaatcccaggtttattaatgaaaggattgaa
aacgtagttcaaaattcatcaagaaagcctgaaaaagtatctaataacacagaacaagtc
aactcacagtcaaagccaaatggatctgttaaagtgtatactcaatctgtgtcattagat
ccttctgcaaagggtgttgaactcacattgttaaagaaagataattacgattctgccact
aacaaccccaccataaaagaccctttgctttcaatcgataccaaagtagacacccgaaaa
caacatgttagtggggaatggggggacaaattagacattgttacacgtaaaaaaaccgaa
gcattagctcctgaaaattttgaaaacatgtgggctaaaggtagaaactacaaaacaaaa
gatggtatgatcatccaacaaagttcttcagccacgtcagcgaatgtggtcaaccagtca
aaggcattgacttcacaagaagtcaaacatggatccaccaaaggtgataataaatcattc
ctttatgatgaagaggaagatgaggaagatgaaacaaggagtaatagtagtgtttattct
agtgaagatgaagaaagtggtgatataacaggattaaattcaccagggactaaagtatgg
gatggaaaaagtaacaggaagcaaactgtaactcacattcatcatccacttgaaagtttt
catgggcaaaaggtgaaaaaaacaggaaaaggtgcttcaccaaaaagaaatccagggaga
aaaaggtcaagagtgagtaatattaataatcagaaagaggaaatttggcatgaagtggaa
agaaaaagcttcttattgggagacatgcaggatgttttgagttcctcaaaagggtattct
aaatcggttgaatctagtgatgaatctgataaagattcattagcaagaactaatagtggc
acaagtgtttcatctttattcccttcgattcctgaaagtaacatgtcatcatccactaat
gcccaaaaacattcacaattggatgattcatttttcagactaagatgtgaggttttgggt
gcaaacattgtgaagagtggatctaaaacatttgctgtgtatcccatatcagttacagat
gtgaacaatgttagttggtctatcaaaagaagatttcgacactttgaggagttacatagg
cgtttgaaggagtatccagagtataatcttcatctcccaccaaaacactttctatcaaca
ggacttgatgtgcctgttattcaagaacgttgtaaacttcttgacatttatttaaagaga
cttatgcagcttccaactatatctggatctattgaagtttgggactttcttagtgttgat
tcccagacatatagtttctcaaattctatatccatcattcaaaccctatcaggtgaaaag
agtagagatgctaggtttgtaggagacccttcaaggagagaagttttggtttcagatgct
gtaatgaagaattcttcatcatcagaagctaaaaataattctataaatgatgggtcaaaa
atatataaaaagaatgcaggtttttcagttgcaaagcctgaagtagtaaaggtaattgga
aaagcattagaggattctgatagtgaccatgaaattgttgcttcaagtcatataataaag
aagtcagaagaagagtctttaaagggattggaggacaatattgtaaatccagcatctggg
attgggattcttacagatgatggtgtttcagaattccctagtgagtgggtcccaccaaat
ttaagtgtccctatattagatcttgttgatgttgtgttccagcttcaagatggtggttgg
atcaggaggaaggctttttgggtggcaaaacaggtcctacagctaggcatgtcagatgcc
tttgatgattggctaattgctaaagttcaactccttcgtaagggctccattgttgcttca
ggaatcaagaagcttgaacagatactttggccagatgggatatttctaacaaagcatccc
aggcggcagcaaccaccacccgccaccgtaaagccaccccaggactcacatgaccgccaa
cctccaccaccaccacccaccaatgaacaaacactgacacatgaagaggctcaagaacag
gaagctcagagacgttctaaactagtttatgagctaatgattgataaggcgccagcagct
gttgtaagtgtttttgggcgaaaggagtatgagcagtgtgcaaaagatgtctattacttt
attcagtcatctgtttgcttaaagctattagcgtatgaccttattgagctgctgctgatg
tcagcatttccagaactggattctgtgttccaacaattgcatgaagaaaagcaaaagttt
ggagctcttgaacactag
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