Lactuca sativa (garden lettuce): 111886852
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Entry
111886852 CDS
T05352
Name
(RefSeq) floral homeotic protein AGAMOUS isoform X3
KO
K09264
MADS-box transcription factor, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111886852
Transcription factors [BR:
lsv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
111886852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
DUF4337
ZapB
Exonuc_VII_L
FapA
UVR
Motif
Other DBs
NCBI-GeneID:
111886852
NCBI-ProteinID:
XP_042756983
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Position
4:complement(74462800..74468602)
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AA seq
243 aa
AA seq
DB search
MSFPNDSGEMSPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL
IVFSSRGRLYEYANNSVKGTIDRYKKACLDPPSSGSVAEANAQFYQQEAAKLRQQIANLQ
NQNRNIMGESLGNMPAKDLKNLESKLEKGISRIRSKKNELLFSEIEYMQKRENELHNSNQ
FLRAKIAENERAQQQHMSLMPGSSDYDLVSPHQPFDGRNYLQVNDLQPNNNYSCQDQTPL
QLV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttccaaatgattcaggggagatgtctccacaaagaaaattggggagaggaaag
atcgaaatcaaacggatcgaaaacacaaccaatcgccaggtgaccttttgcaagcgtcgc
aacggtttgctcaagaaggcttatgagttatctgttctttgtgatgctgaagttgctctt
attgtcttctctagccgaggtcgactttatgagtacgcaaataacagtgtaaaaggaacc
attgataggtacaaaaaagcatgcctagacccaccaagcagtggatctgtagcagaagcc
aatgctcagttttaccaacaagaagctgcaaaactgcgtcagcaaatagcaaatcttcag
aatcaaaacaggaacatcatgggtgaatcgctgggaaacatgccagcaaaagacctcaag
aatcttgaaagcaagttagagaaaggcattagcaggatcagatcaaaaaagaatgaactt
ctattttctgaaatcgagtatatgcaaaaacgagaaaatgagttgcataatagtaaccaa
ttccttcgagcaaagatcgctgaaaatgaaagagcacaacagcaacacatgagcttgatg
cctggaagttctgattacgatttagtatcacctcatcagccattcgatggaagaaactac
cttcaagtcaatgatcttcaacccaataacaattactcttgccaagatcaaacacctctc
cagctagtgtaa
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