Lactuca sativa (garden lettuce): 111886967
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Entry
111886967 CDS
T05352
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111886967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111886967
03036 Chromosome and associated proteins [BR:
lsv03036
]
111886967
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111886967
Coactivators
SAGA/TFTC/STAGA complex
111886967
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111886967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
FAZ1_C
Motif
Other DBs
NCBI-GeneID:
111886967
NCBI-ProteinID:
XP_052626527
LinkDB
All DBs
Position
4:complement(262405245..262411307)
Genome browser
AA seq
867 aa
AA seq
DB search
MDPSIMKFLEEDEDETMHSGADVEAFTAALNRDIEGDNTSTSQTPTTTDAGGALSQGTNH
TPSQLFQQWQSANREGNTSYSNEEEVKPQIHEQQSSTMEANRHGSGSGSETQHPPNDTSR
EMNLSQSEPSRPQDDQHNVHMSQTMNAQNTEKNPVNSQEPNIARNPENESQLQRMHRMGN
QQQQQAMSATGQAANAMNRPSGKQVPFALLLPVIEPQLDKDRAMQLQGLYVRLRNNNINK
EEFVRHMRSLVGDHMLKMAVYKLQQGQGQLSGKHNIQKPSPYVPPSSIHQSAESSSLPMD
NNAQKSRLLEHQSDASIHNASKPDREQQPFPVQGLVKQQQQHMQFPQPPFPNYGNPSGNF
HPGSSPNMNMTSQSFKPQSHDLQMRQGPVHHQVGGIGNPMSQNAFNDMKRMHLGHWQSSM
HKDQMLSTMAYVKPEPVDQISDQQQHKPPQQGQSSFSQGQIEQGGGIAGSSKDDSFEMMA
SSRPGFSTPMSKPEPMSITAQLERQNASAGNPSLAAAGNSNAKTPPKKPSVGQKKPLEAP
VSTISKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLFSGSKEDSRVSEASRKVVQE
EEERLILQKIPLQKKLAEIMAKCGVKNRGNDVERCLSLCVEERMRGLISNLIRLSKQRVD
IEKPRHRTVITSDVRQQIMSMNQKVREELEKKQADAEKLQRADEPDGGGIDGEDGRGKSK
ANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGGADVASSTSHSQPSV
DVGPKPMSNSKDNADTERSSGVTTATPTPGPVRKSMRNQELGQNGSSVPRTISVKDVISV
LGREIQMSRSTLIYRLYEKVRSEHASE
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctataatgaagttcctcgaagaagacgaggatgaaacaatgcattcaggg
gcagacgttgaggcgtttactgctgccctaaacagggatattgaaggggacaatacttca
acatctcagactcccactactacagatgcaggcggagctttatctcaaggaacgaatcat
actccaagccagttgtttcaacagtggcaatctgccaaccgtgaaggaaacaccagttac
tctaacgaagaggaagttaagccacagatacatgagcagcaatcatctaccatggaagca
aatcgacatggatctggttctggttctgagacccaacatccaccaaatgatacctcacga
gaaatgaatcttagccaatcagaacctagcagacctcaagatgatcaacataatgttcat
atgtctcaaaccatgaatgcacagaatactgaaaagaatcctgtcaattctcaagagcca
aatatagcaaggaacccagaaaatgaatcccaattgcaaaggatgcatagaatgggaaat
cagcaacaacagcaagcaatgtctgcaactggtcaagcagctaatgcaatgaatcggcca
tctggaaagcaggtgccatttgctctactgcttcctgttatagaaccacaacttgataaa
gacagggctatgcaactccaaggtctatatgttcgattaaggaacaataacattaacaaa
gaagaatttgtcaggcacatgcgtagtcttgtaggtgatcatatgcttaagatggctgtc
tataagttgcaacaagggcaagggcagctttctggtaaacataatattcaaaagccatct
ccatatgttccaccttcatctatccatcaatcagctgaatcaagcagtctaccaatggat
aacaatgctcaaaagtcaagattgttggaacaccaatcagatgcatctatccataatgct
agtaagccagatagggagcagcaaccatttccagtacaaggacttgtgaaacaacaacaa
caacatatgcagtttccacaacctccttttccaaattatggaaaccctagtggaaacttt
cacccagggtctagtccaaatatgaatatgacctcacaatcttttaaaccacaaagccat
gatttacaaatgaggcaaggtccagttcatcatcaggtaggaggaattgggaatccaatg
agtcaaaatgcgtttaatgacatgaagagaatgcatttaggccactggcaatcatcaatg
cataaagatcaaatgttgtcaacaatggcttatgtgaaaccagaacctgtggatcagatt
agtgatcaacaacaacataaaccaccacaacaagggcaatcttcattttctcagggtcag
attgaacaaggtggtggaattgcagggtcttcaaaggatgatagttttgagatgatggct
tcttcaaggcctggtttctcaactcctatgagtaagcctgagcctatgtccatcacagca
cagcttgaacgccagaatgcgtctgctggaaatccttcattagcagctgctggaaatagc
aatgcaaagactccccctaaaaagccatctgttggccagaaaaaaccattggaagcacct
gtttctacaataagtaagaagcaaaaagtgtcgggagcattttcggaccaaagtattgag
caacttaatgatgtcactgctgtcagtggagtcaatctcagggaagaggaagaacagcta
ttttctggctccaaagaagacagtagagtttcagaagcttcacgaaaggtcgttcaagaa
gaagaagaaaggttgattttgcagaaaattccactccagaagaaattagcagaaatcatg
gcaaaatgtggtgtaaagaacagaggcaatgatgtggagaggtgcttgtcactgtgtgtt
gaggaaagaatgcgtggattgattagcaacctcatcagactttcaaaacagagggttgat
attgagaagccaagacatcggacagttataacctcagatgtgagacaacaaatcatgtcc
atgaatcaaaaagtccgagaagaattagaaaaaaagcaagctgatgcagaaaaactccaa
agagcagatgagcctgatggtggtggaattgatggtgaagatggtcgtggaaaatctaag
gcaaacaaagaggaagatgataagatgcgaaccacggctgccaatgtggcagcacgggcg
gctgttggcggagatgacatgctgtcaaaatggcaactaatggctgagcaggcccgccag
aaacgcgaaggcggcggtgctgacgtggcgtcatctacttctcactctcagccaagtgtt
gatgttggtcccaagcccatgtcaaattctaaagataatgcggataccgagaggagctct
ggtgttacaactgctactcctactcctggtccagtaaggaaatcaatgaggaatcaagag
ttgggtcagaatggtagtagcgtaccacgaaccatctctgtgaaggatgtgatttctgtt
ttggggagggagattcagatgtcaagatccaccttaatttatcgtctttatgaaaaagtg
agatctgaacacgcctctgaatga
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integrated database retrieval system
