Lactuca sativa (garden lettuce): 111887166
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Entry
111887166 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111887166
KO
K03267
peptide chain release factor subunit 3
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111887166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111887166
03012 Translation factors [BR:
lsv03012
]
111887166
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111887166
Translation factors [BR:
lsv03012
]
Eukaryotic type
Release factors
111887166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
111887166
NCBI-ProteinID:
XP_052624262
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Position
2:45455918..45464650
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AA seq
519 aa
AA seq
DB search
MDNIEEDIRALQLDSSGEDSNMVTNENGGEHQESIALDKLEEDLRNESQTDSHMEEDANP
HTGHSDPQAAIAVKEQATSAPEPVDDEKNKKRHLNVVFIGHVDAGKSTIGGQILYLSGQV
DERTIQKYEKEAKDKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETETTRFTILDAPG
HKSYVPNMIMGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNK
MDDPTVNWSKERYDEIESKMVPFLKSSGYNVKKDIQFLPISGLFGTNMQTRMDKKICPWF
NGQCLFEALDVIEVPLRDPTAPFRMPIIDKFKDMGTVVMGKVESGSIREGNNLLIMPNKV
QVKVLALFMDEDRVRSAGPGENLRVRVSGIEEEDILSGFVLCSIEKPIPVVHEFIAQLQI
LELLENAIFTAGYKAILHIHSVVEECEIIELMHQLDPKTRKPMKKKVLFVKNGAAVICRI
QVTNMICIEKFTDFQQLGRFTLRSEGKTVAIGKVTDLRA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggataatatcgaggaggacattcgcgctttgcaactggactcatctggtgaagatagc
aacatggtgactaatgagaatggtggggagcatcaagaatccatagctctggataaattg
gaagaagatttgaggaatgagtcacaaaccgactcccacatggaggaggatgctaacccc
cacacagggcattctgatccacaagctgccattgcagtgaaagagcaagcaacttctgct
ccagaacctgttgatgatgagaagaataagaagagacacttaaatgtggtattcatcggt
catgttgatgctggaaaatctaccattggaggccagatactttacctcagtggccaagtt
gatgagcgtacaattcaaaaatatgagaaagaagccaaggataagagtagagagagctgg
tacatggcatacattatggataccaatgaagaggagagagcaaaggggaaaacagttgaa
gttggacgtgcacattttgagacagaaactacacgtttcaccatattggatgcacctggg
cataaaagttatgtacctaacatgattatgggtgcttctcaagctgatataggagtactg
gtcatatctgctcgaaagggagaatttgaaactggatatgagagaggtggacaaactcgt
gaacatgttcaacttgcaaagactttgggtgtcactaagctcttggttgttgtcaataaa
atggatgatccaactgttaactggtcaaaagagaggtatgatgaaattgaatcgaaaatg
gttcctttcttgaaatcttcaggatacaatgttaaaaaagatattcagtttcttccaata
tctggtctttttggaactaatatgcaaacaagaatggacaagaaaatatgcccttggttc
aatggtcaatgtctctttgaagctcttgatgttattgaagttcctcttcgtgatccaact
gctccatttagaatgcctattattgacaagtttaaggacatgggaactgttgttatggga
aaagttgaatctggtagcatacgtgaaggcaataatcttctcataatgccaaacaaggtt
caagtgaaagttcttgctctatttatggatgaggatagagtgaggagtgcgggccccggt
gagaatctacgtgtcagagtatctgggattgaagaagaagacatactttcaggctttgtt
ctttgcagtattgaaaaaccaataccagtggttcatgagttcatagctcagttgcaaatt
cttgagttgttggaaaatgctattttcactgctggatacaaagctatattgcatattcac
tctgttgttgaggaatgtgagatcattgagttgatgcatcaacttgatcctaaaaccaga
aaaccaatgaaaaagaaggtgctttttgtcaagaatggtgctgctgtcatatgccgtatt
caggtgactaatatgatatgcatcgagaaattcacagactttcaacaacttggtcgattt
acactccgctctgaaggaaaaacagttgcaattggaaaagttacagatcttcgtgcataa
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