Lactuca sativa (garden lettuce): 111887178
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Entry
111887178 CDS
T05352
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111887178
03036 Chromosome and associated proteins [BR:
lsv03036
]
111887178
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111887178
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111887178
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111887178
microRNA pathway
RISC loading complex
111887178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
111887178
NCBI-ProteinID:
XP_023739101
LinkDB
All DBs
Position
2:45334449..45342163
Genome browser
AA seq
1103 aa
AA seq
DB search
MVRKKRTETSGGEGSQPQEAVSGQGSGAQRPPQQQQQQQQQGGGGGGGGYQGRGQGGYQG
RGQGGYQGGGYQGGGGQGGGYQGGQPQGGRGWVQRGGPPPQRGGPPPPQQYYGGPPDQPQ
QGQQQQRPPRGTAPPQRRGGGGGSGPSYAGGPSRPSVPELYQATQAPQQPVATLQPIPHV
KPAEVHHGESSSTSPTDQVVDESVTQFQQLTVQQEEPMQIAPASSKSMRFPMRPGKGSTG
IRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVLGELVKLYRDSHLGKRLPAYD
GRKSLYTAGPLPFVSKEFKITLVDEDDGTGAARRERDFKVVIKLASRADLHHLDMFLQGR
QADAPQEALQVLDIVLRELPTNRYTPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQ
MGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSARPLSDADRVKIKKALRGVKVEVTHRG
NMRRKYRISGLTSQATRELNFPVDDRGTMKSVVEYFRETYGFSIQHIQWPCLQVGNTQRP
NYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQEREKDILKTVSHNAYGQDPYAKE
FGIKISQNLASVEARILPPPRLKYHDTGRERDCLPQVGQWNMMNKKMVNGGTVASWICIN
FARNVQDNIAKAFCQELAQMCNTSGMAFNPEPVLPAFTGRPDQVERVLKARFHDAMTKLQ
PHKKELDLLVVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVFRMSKQYLANVALKIN
VKVGGRNTVLADALSRRIPNVSDVPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITK
YAGLVCAQAHRQELIQDLFKEWQDPNRGKVSGGMIKELLISFRRATGQKPQRIIFYRDGV
SEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNSVDRSGN
ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFSADDLQSLTNNLCYT
YARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMISGAAGGRGGMGGGGGRSTRAP
GANAAVRPLPALKENVKRVMFYC
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaagaggactgaaacctccggtggtgagggatctcagcctcaggaggct
gtttccggacaaggtagtggtgctcaaaggccaccacagcaacaacaacaacaacagcaa
cagggaggtggtggtggtggtggtggctaccagggtagaggacagggtggttatcaagga
agagggcagggtggttatcaaggtggtggttaccaaggtggaggaggacaaggaggtggt
taccaaggcggacaacctcaaggaggaagaggatgggttcagaggggaggaccaccacca
cagcgtggtggcccaccaccaccacaacaatactatggtggtccacctgatcaaccccaa
caaggtcaacaacaacaaaggcctccaagaggaactgcaccacctcagcggcgtggtggt
ggtggtggatctggaccttcgtatgccggtggcccttcaaggccatcggttcccgagctg
taccaagctacacaggctccccaacagcctgtggccaccttgcagcctattccacatgtg
aaaccagctgaagtgcatcatggcgagtcgtcttccacttcacccactgaccaggttgta
gacgagtcagtgactcagtttcagcaactcactgtgcagcaagaagagcccatgcaaatc
gcacctgcttccagcaaatccatgagatttcctatgcgtcctggaaagggtagcactgga
atcagatgcattgtcaaagcaaaccatttctttgctgaattacctgataaggatttacat
cagtatgatgtgacaatcacaccagaagtaacttcacgtggtgtgaatcgagctgttttg
ggagaactggtgaaattgtacagggattctcatcttggaaagaggcttcctgcatatgat
ggaagaaagagtctgtatactgctggacctcttccttttgtttcaaaagagttcaaaatc
acccttgttgatgaagatgatggaacaggagctgctaggagagagagagacttcaaagtt
gtgatcaagttagcttcacgtgcagatttacatcacctggatatgtttttacaagggagg
caagcggatgctccacaagaagctcttcaagttctggatattgttttaagggaactgcct
actaatcgatatacccctgtggggaggtctttttattcccctgatcttgggcgtagacaa
ccattgggtgaaggtttggaaagctggcgtggtttttatcagagcattaggcctacacaa
atgggtctttccctgaatattgatatgtcttctactgctttcattgagccactgcctgtg
attgactttgtaacacagcttctgaacagggatgtttctgcaagacctttatctgatgca
gaccgagtcaagatcaaaaaggcactgagaggagtcaaggttgaagttacccaccgtgga
aatatgcgcagaaagtatcgcatatctggtttaacatctcaagcaacacgagaactaaat
tttccagttgatgacagaggcacaatgaaatctgtggttgaatactttcgggaaacttat
ggattttccattcagcatattcaatggccatgtctgcaagttgggaatactcagaggcca
aattatctccctatggaggtatgcaaaattgtagagggccaaaggtattccaagaggcta
aatgagcgacaaatcactgctcttcttaaggtgacatgtcagcgacctcaggaaagagag
aaggatattttaaagactgttagtcacaatgcttatggtcaggatccttatgctaaggaa
tttggtataaaaattagccagaatttagcctctgttgaagcccgaatattacctcctccc
aggcttaaataccatgacacaggacgtgaaagggattgtctgcctcaagttggccagtgg
aacatgatgaacaaaaaaatggttaatggtggaacagtcgccagctggatttgcataaat
ttcgcacgaaatgttcaagataatattgctaaagctttctgtcaagagcttgcacagatg
tgcaatacctctggcatggcatttaatcctgaacccgtgcttcctgcatttactggtcgt
cctgatcaggttgaaagagtcctgaaagctcgtttccatgatgcaatgactaaacttcaa
ccccacaaaaaagaacttgatttgcttgttgtcattctcccagataacaatggctcactt
tatggtgatttgaagaggatctgcgagactgatcttgggattgtttcacaatgctgtcta
acaaagcatgtgttcaggatgagtaaacagtaccttgcaaatgtagccttaaagatcaat
gtgaaagttggaggaaggaatactgttcttgctgatgcattgtcaagaagaatccctaat
gtcagtgatgtcccaacaatcatatttggtgctgatgtcactcaccctcaccctggagaa
gattccagcccctcaattgctgctgttgttgcttctcaagattggcctgagattacaaag
tatgcgggattagtctgtgctcaagctcatcgccaagaactgattcaagatctgttcaag
gaatggcaggatcctaatagaggcaaagtctctggtggcatgatcaaggagcttctcata
tccttcagaagagcaactggccaaaaaccacagcgcatcatcttctatagagatggtgtg
agtgaagggcagttttatcaagtgcttctttatgagcttgatgcaatccgaaaagcgtgt
gcatcattggagccaaactatcagcctccagtgacatttgttgtggttcaaaaacgtcat
cacaccagattgtttgctaacaaccaccatgatcgtaattctgttgacagaagtggaaac
attcttccaggcactgttgttgattccaagatctgtcatcccaccgagtttgatttttat
ctctgcagccatgctggtattcagggtacaagtcgtccagctcattaccatgtgttgtgg
gatgagaataagttttcagctgatgatctgcagtcactcacaaataacctttgttacact
tatgcgaggtgcacacgatctgtttcaattgtgccacctgcatactatgctcatctggct
gcattccgagcgagattttacatggagccagatacatcagacagtgggtcaatgataagt
ggtgcagctggtggacgtggtgggatgggtggtggtggtgggaggagcactcgtgcacca
ggtgcaaatgcagcagttaggcctcttcctgccctcaaggagaatgtcaaacgtgttatg
ttctattgttaa
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integrated database retrieval system
