Lactuca sativa (garden lettuce): 111887790
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Entry
111887790 CDS
T05352
Name
(RefSeq) partner of Y14 and mago isoform X1
KO
K14294
partner of Y14 and mago
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111887790
03015 mRNA surveillance pathway
111887790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111887790
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111887790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
RILP
Talin_middle
Motif
Other DBs
NCBI-GeneID:
111887790
NCBI-ProteinID:
XP_023739708
LinkDB
All DBs
Position
7:141159797..141161349
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AA seq
248 aa
AA seq
DB search
MATKGGGSGRGEGGAKELAAQISKTLKEGEKLLAPTRRPDGTLRKPIRIRAGFVPQDEVA
VYKSKGSKLKEETVPPGYDPEQDVVTKPKSKSAKRNERKKEKRLQVSLSDPPFHMFFCLR
FLPDFHTCLFDSDQGKNEASSTGDEEQALESVESIASHINEITISGNPCVPTTTPPSTSM
ESSATTEHVPDIDKRIRALKKKIRLMEAQQQKAGHDHDLKQEQVEKAAKLEDWRRELKLL
QETSQGSL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaagggaggcggcagcggcagaggggaaggaggagccaaagagctagcagct
cagattagcaaaaccctaaaagaaggtgaaaaactcctcgctccaacccgacgacccgac
ggcactctacgcaagcccattcgaattagggctggtttcgtccctcaagatgaagttgct
gtttacaaatccaaaggctctaagttgaaggaggaaactgtgcctcctggttatgatccc
gaacaagatgtcgtcaccaaacctaaatccaaatcagctaagagaaatgagcgaaagaag
gagaagcgcttgcaggtatcgttatcagatcccccatttcacatgttcttttgtttgcgt
ttcctgccggattttcatacgtgtttatttgattccgatcagggtaaaaatgaagcttca
tctactggagacgaagaacaagcattggaatccgttgagtcgattgcgtcccacataaac
gagatcacgatttctggaaatccatgtgttcctactactactcctccctcaacttcaatg
gaatcttcagctacaacggagcatgttcctgatattgataaacgaattcgtgcactgaag
aagaagatccgattgatggaggctcaacaacagaaagcagggcatgatcatgatctgaaa
caagaacaagtggagaaggctgctaaattggaagattggaggagagaattgaaacttttg
caggaaacttctcagggatctttataa
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