Lactuca sativa (garden lettuce): 111887874
Help
Entry
111887874 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111887874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111887874
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111887874
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111887874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Prok-RING_4
zf-RING_UBOX
PHD_4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-Di19
Motif
Other DBs
NCBI-GeneID:
111887874
NCBI-ProteinID:
XP_023739781
LinkDB
All DBs
Position
1:85394968..85397463
Genome browser
AA seq
304 aa
AA seq
DB search
MGPGGNIFQDVSESRADFGVKSANIEGRSCLRLCGSAGGRHGLASNSAVHDLLECPVCLG
IMHPPIHQCPNGHTICVVCKSKVQNSCPICRQELGNIRCLALEKVAESIELPCKYHYLGC
HDIFPYHSRIRHEENCKYRGYNCPYAGTECYVTGDIPFLVAHLKTDHNVDMHDGSTFNHR
YVKPNPHEIENATWMLTIFNCFGYQFCLHFEAFHLGMAPVYMAFLRFMGDENDASKFSYS
LEVGGNGRKLKWQGVPRSIRDSHKTVRDSLDGLIITRNIGLFFSGGDRKELKLKVAGRIW
REQS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggccctggtggtaatatttttcaagatgttagtgaatcgcgtgctgattttggtgtt
aaatctgcaaatatagaaggaagaagttgcttgagattatgcggatctgctggtggaagg
catggattggcttcaaacagtgctgtccatgatctactcgagtgccctgtctgccttggc
ataatgcaccctccaattcatcaatgtccaaatggccacacaatatgtgttgtatgtaaa
tcaaaagtgcaaaatagctgtccgatatgccgacaagagcttgggaatattcggtgtttg
gcattggagaaagttgcagagtcgatagagttgccatgcaagtaccattatttgggatgc
catgatatttttccttatcatagtaggataagacatgaggagaattgtaaataccggggg
tataattgtccatatgcgggaacggaatgctatgtcacgggtgatattccattccttgtt
gcacatctcaagacagatcataatgttgacatgcatgatgggtccacattcaaccaccgc
tatgtgaagcccaatcctcatgaaattgaaaacgccacatggatgttaacgattttcaat
tgcttcgggtatcaattttgtttgcactttgaggcatttcatttgggcatggcacccgtt
tacatggcgtttttgcgttttatgggggatgaaaatgacgcgagtaaattcagttatagt
ttggaggttggtgggaatggaagaaagctaaaatggcaaggggtcccacggagtatccgt
gatagtcataaaacggttagagatagtctagatgggttgatcataacaagaaatataggg
ttgtttttctccggtggtgataggaaggagctcaagttgaaagtggccggacggatttgg
agagagcagtcttga
DBGET
integrated database retrieval system
