Lactuca sativa (garden lettuce): 111887906
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Entry
111887906 CDS
T05352
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111887906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111887906
Membrane trafficking [BR:
lsv04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
111887906
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
111887906
NCBI-ProteinID:
XP_023739811
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All DBs
Position
3:complement(262264084..262266989)
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AA seq
200 aa
AA seq
DB search
MKITALLVLKCNPDGSSDPVILANATDVSHFGYFQRSSVKEFIVFVGRTVAKRTPPSQRQ
SVQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVLDEYQKNFGDSWKAVEADQSQ
PWPYLDEALIRFQDPAQADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLS
TASQMFYKQAKKTNQCCTIL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccgcgttgcttgttctcaaatgcaatcccgacggatcgtcggatccggtg
atcctagcaaatgccacggacgtcagccatttcggttacttccagaggtctagcgtcaag
gaattcatagtctttgttggtcgtacagtcgctaaacgtacgcctccatcgcaacgtcag
tccgttcaacacgaagaatacaaggtgcattcctacaatagaaatggtctttgtgctttg
gggtttatggatgatcactatcctgttcgaagtgcattttctcttttaaaccaagtgtta
gatgaataccaaaagaattttggtgactcatggaaagctgtagaagcagatcaaagtcaa
ccatggccttatttagatgaagctttgatcagatttcaggatcctgctcaggcagataag
ctgctgaaaattcagagggaattggatgaaacaaaaattatacttcacaagactattgat
agtgtccttgaaagaggtgaaaagttggatagtttggttgagaaaagttcagacctcagt
acagcttcacagatgttctacaaacaggcgaagaaaacaaaccaatgttgtacaatattg
taa
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