Lactuca sativa (garden lettuce): 111887922
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Entry
111887922 CDS
T05352
Name
(RefSeq) pyridoxal 5'-phosphate synthase subunit PDX1.3
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00750
Vitamin B6 metabolism
lsv01100
Metabolic pathways
lsv01240
Biosynthesis of cofactors
Module
lsv_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
111887922
Enzymes [BR:
lsv01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
111887922
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
Motif
Other DBs
NCBI-GeneID:
111887922
NCBI-ProteinID:
XP_023739824
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Position
5:313451410..313452745
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AA seq
308 aa
AA seq
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MDGTGVVAVYGNGTLTESKKSPYSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA
LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDES
EVLTLADDMNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
RSVMGDIRVLANMDDDEVFTFAKKLGAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM
MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYTDPKVLAEVSCGLGEAMVGLNLDNNV
ERYANRSE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaccggagtagtggcggtgtacggtaacgggaccctaacggagagcaagaaa
tcaccatactccgtcaaggttggcctcgctcagatgctccgtggcggcgtcatcatggac
gtcgtcaacgcagaacaagcccgcatagccgaagaagccggcgcctgtgctgtcatggcc
ctggagcgcgttccggccgacatccgtgctcaaggcggcgttgcgcggatgagcgacccc
caactcattaaggaaatcaaacaggccgtcacgattccagtcatggcgaaggctaggatt
gggcatttcgttgaggctcagattttggaggcgattggagttgattacgtagatgagagc
gaagttttaacgttggctgatgatatgaatcatatcaacaaacataatttcaggattccg
tttgtttgtggttgtcgtaatttgggtgaggccttgcgtaggattcgtgaaggcgccgcc
atgattcgtaccaaaggcgaagcaggaactggcaacataattgaggcagtgcgacatgta
agatcagtgatgggggacataagggttcttgcaaatatggatgatgatgaagtcttcact
tttgccaaaaaactcggtgccccatatgatttggtgatgcagaccaaacaattagggcgg
cttccggtggtacagtttgccgccggtggtgttgcaactccggcggatgccgccttgatg
atgcaattgggatgtgacggtgtgtttgtggggtccggtgtgttcaaaagtggtgacccg
gctcgtagggctcgagccattgttcaagcggtcacacattacacggaccccaaggtgctt
gcggaggtgagctgtggtttgggtgaagccatggttgggttgaaccttgataataatgtt
gaaaggtatgctaataggtctgaataa
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