Lactuca sativa (garden lettuce): 111888018
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Entry
111888018 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111888018 isoform X1
KO
K09527
DnaJ homolog subfamily C member 7
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsv03110
]
111888018
Chaperones and folding catalysts [BR:
lsv03110
]
Heat shock proteins
HSP40 / DNAJ
111888018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
DnaJ
TPR_19
TPR_11
Motif
Other DBs
NCBI-GeneID:
111888018
NCBI-ProteinID:
XP_023739901
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Position
8:126164053..126168794
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AA seq
1175 aa
AA seq
DB search
MSPAVEDFLSPSSSSTQRSYFQNPNPSAQGHFTDSGIFNNSFNLMNSSKLDFDCSNDAAA
AEATTVRSSRRKHVKVKKQSSCNGPVSKKSDNSTRDTTGFVFNATTSGSVLSSSLGKTGC
DGNDERQRDGEVLDFNLMRFTMGVTNNNQLGNKMGAEKVQKSGNNFQSGDLNFVFGADDE
MGDNRKASERGSNKFGKLNGVDILFGANMNNGVLNSNSSNIGHEHGREGVGLHLDDSESS
GTVRSSGIDGFMKVNNFKTMPDFHLVNSMSFLNLGSKGSGEAAPSMNSNLKTEENNTSDS
KKFENLGFVFSANHRDFQTDSSIGKQKSKEKVDKLAPESANRNVDSGVIFGNNKVNGIFH
IGTHNEKKSSFKGNMKVDDETNIMKSQGAGSSDHLKKQGDNVDSVLDGNSTFVFGSNLGN
AFGDNPQCKVPHDTKTSNIHDPTKVSTTKNKINEAGTTNNFSFSSNASFTGFNTPDINIP
VSFTSDMFPGLGKKLEFSKNNSVSQRKLKKTKAKVRQQSSNRPQVILTHLSEGVTQSCEE
SPGSCSPMDVSPYWGAADCAPTSTNPATSQVQNEDAVDTTEKLGAQNFSPSVTSFASADM
AVRQRPHLKKYKLRTGRVNVSHSHKPEHTKATDQETCDSWRKRGNEAYKSGDLSEAEVCY
SKGISSIQHTETPGVCIQPLLLCYSNRAATRMALGRMREGLNDCRMAAALDPNFMKVNLR
SANCHLLLGEVDDASYYYNKCLESEEIVCLDRRITIEAAEGLQKAQKVSDYLKLAAEILE
QKTYESATNALGTITDALSISSYSEKLLNMKGEALLMLGKHKEVVQLCEQTLDTAEKNFS
SVCKISLRLWRWNLMSKSYFHLGRLEIALDLMEKHEQLRSKIVGPDESLAHLAVTIRELL
HCKNAGNEAFQNGKHTEAVEHYSAAISKSIESHSFAAVCFCNRAAANQSLGEIIDAIGDC
SIAIALDTSYPKALSRRATLLEMIRDYKHASDDLQRLISILETQSQNSQNSHKSASNGSV
KDLRRARRRLSILEEKAKKERSLDLYLILGLKPTDGAADVKKAYRKAALRHHPDKVNQQW
KAIAESIQMDADRLFKMIGEAYAVLSDPAKRSKYDLEEEMWDDMEINVGSSNRRGSDFFG
SQESRKSYGYSNGNSHYYYWQQEPRKSYHTSYPRW
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccggcagtcgaagattttttatccccatcatcgtcctccacacagcgttcgtat
ttccagaaccctaaccctagcgctcagggacattttactgattcaggtatattcaataat
agtttcaatctcatgaattctagtaaacttgactttgattgttcaaatgacgcggcggca
gcggaagcgaccactgttcgttcttcgaggaggaaacacgtaaaagtgaagaaacaatca
agctgtaacggtccagtgagtaaaaaatctgataatagtacacgtgatactactggtttc
gtgttcaatgcgactactagtggttcagtgttaagctcgagtttagggaaaacgggatgt
gatgggaatgatgaacgacagcgtgacggtgaggttttggattttaatctaatgcggttt
accatgggagttactaataataatcaattaggaaacaagatgggtgcagaaaaggtacag
aagagtggaaataattttcagtctggtgatttaaattttgtttttggagctgatgatgaa
atgggggacaatagaaaagctagtgaaagaggctctaataagtttggaaaacttaatggt
gtggatattttgtttggtgcgaatatgaataatggtgtactgaactcgaattcaagcaat
attgggcatgaacatgggcgtgaaggtgtaggattgcatctagatgatagtgaatctagt
ggaacagttagaagctcaggtattgatgggtttatgaaggtcaataacttcaaaactatg
cctgatttccatctggtcaattcaatgtcattcttaaatttgggatcaaaaggatcaggt
gaagctgcaccctcgatgaatagcaacctaaagacagaggagaacaatacatcagatagc
aaaaaatttgaaaatctgggatttgtgttttctgccaatcatagagattttcagacagat
tcgagtattggaaaacaaaaatccaaagagaaggttgacaagttagcacctgaaagtgct
aataggaatgtagatagtggagtaatatttggaaacaacaaagtcaatggaatctttcat
attggaactcataatgaaaaaaaatccagcttcaagggaaacatgaaagttgatgatgaa
acgaacattatgaagagtcaaggagcaggaagctctgatcacttaaagaagcaaggggat
aatgtagattctgttcttgatggtaattccacttttgtttttggaagtaatttaggcaat
gctttcggtgacaaccctcaatgtaaagtcccccatgacacaaagacttcaaatatccat
gaccccacaaaagtcagtactactaagaataagatcaatgaagctggaacaaccaacaac
ttcagcttttcaagcaatgcttcatttacaggcttcaatacaccagatataaacattccg
gtttctttcacatcagatatgtttcctggtttaggtaagaagttagaattcagtaaaaac
aattctgtaagccaaagaaagttaaaaaagaccaaggcaaaagtgagacaacaatctagc
aatcgtccacaagttatcctgactcatttatctgaaggagtcacacagtcttgtgaggag
tctcctggatcttgttcacctatggatgtttctccttattggggtgctgctgactgtgca
ccaacttctaccaaccctgcaacctctcaggttcaaaatgaagatgctgttgatactaca
gagaagcttggggcccaaaacttttcaccttctgttacatcatttgctagtgctgacatg
gcagtgagacaacggccacatctgaagaagtataagctgagaactggtcgtgttaatgtg
tcccattctcataaacctgagcacacaaaggctacagatcaagaaacatgtgacagttgg
cgaaaaaggggaaacgaggcttataagagtggagatttatcagaagctgaagtatgttat
tcaaagggtattagttcaatacaacatacagagacacctggcgtttgtatacagcctctt
cttttgtgttatagcaatcgtgcagctacacgcatggctcttggaagaatgagggaaggt
ctaaacgactgtagaatggctgctgcattagatcccaatttcatgaaggtcaacttgaga
tctgcaaactgtcatttacttctaggagaggtagatgatgcatcatactattataacaaa
tgcttggagtccgaggaaatcgtttgcttggataggagaatcacaattgaagctgcagaa
ggcctgcaaaaggcacagaaagtctcggattatctgaagctggctgcagagattcttgaa
cagaaaacatatgagtcagcaaccaatgcattgggaactatcactgatgctttgtcaata
agctcctattcagagaaactacttaatatgaaaggagaggctcttctcatgctggggaag
cataaagaggtggttcaactgtgtgagcaaaccctagatacagccgaaaagaatttttca
tcagtatgcaagatctcattaagactttggaggtggaacctgatgtcaaaatcctacttt
catttgggtaggcttgaaatagctcttgacttaatggagaaacatgagcaactaagaagc
aagattgtgggtcccgatgagtcattagctcatttggctgttaccattcgtgaactttta
cactgcaagaatgcaggaaatgaagcctttcagaatggtaagcatacagaagcagtagag
cattacagtgctgcaatatcaaagagtatagaatcacactcgtttgcagctgtttgtttc
tgcaatcgtgctgctgcaaaccaatctttgggagaaatcattgatgcaattggagattgc
agtatagctatagctctcgacacaagttacccaaaagcactttcgagaagggccacctta
ctggaaatgattcgagactacaaacacgcatctgatgatcttcaaagactcatctccatt
cttgaaacacaatcacagaattcacaaaactctcacaagtctgctagtaatggcagtgtg
aaagatctaagaagagctcgacgtcgtctttctattctagaagaaaaagcaaaaaaagaa
agatccttagacctttatctcattctgggattaaaacctacagatggagcagcggatgtt
aaaaaggcataccgaaaagcagctctgagacatcatccagacaaagtcaaccaacaatgg
aaagcgattgctgaatcgattcagatggatgctgacagactcttcaagatgattggagag
gcatatgctgtgctttcagaccccgccaagaggtcaaagtatgatcttgaagaggaaatg
tgggatgacatggagataaacgtaggcagcagtaacagaagaggatccgattttttcggt
tcacaagaatcgagaaagtcatacggatacagtaacggtaactcccattattactattgg
cagcaggaaccgagaaaaagttaccatacctcctatccacgttggtaa
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