Lactuca sativa (garden lettuce): 111888218
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Entry
111888218 CDS
T05352
Name
(RefSeq) transcription factor CSA
KO
K09422
transcription factor MYB, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111888218
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111888218
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Myb_Rap1
DUF6581
Motif
Other DBs
NCBI-GeneID:
111888218
NCBI-ProteinID:
XP_023740121
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Position
4:complement(395635897..395636929)
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AA seq
198 aa
AA seq
DB search
MPVSFAPSSQPGVLDKMTKSEEKPNSQHGEDDDSRRQFVVKGHWKPSEDRKLRELVALHG
PKNWNMISEQLPGRSGKSCRLRWVNQLDPQIKTSMFTREEDETLMAAHMVFGNQWSHIAK
FFPGRTDNGIKNHWHVLTSRRRKHIVGVPSSSSSSSSFRCVSGDSTNGSSSSTITLMGKS
TVINEDTSMLCMNTPDSG
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtcgtttgctccaagttctcaacctggtgttcttgataaaatgacgaagagt
gaagaaaaaccaaatagtcaacatggagaagacgacgattcacgtcggcagttcgttgtg
aaaggccattggaagccatcggaggaccgtaaattaagagagcttgtcgctcttcatggg
ccgaaaaactggaatatgatatcggagcaacttcctggaagaagcgggaagagttgcagg
ctccgatgggtgaatcagttagatccacaaataaagacgtcaatgttcactagagaagaa
gatgagacgttaatggcggctcacatggtgttcggcaaccagtggtctcacatcgctaag
ttctttcccggaagaactgataacggaatcaagaatcactggcacgttttgacatcccgg
cgacggaaacacatcgtcggggttccttcttcttcttcttcttcttcttcttttcgctgt
gtttcaggtgatagtaccaatggcagttctagtagtaccatcactctcatggggaaatca
actgtgattaacgaggatacaagtatgttatgcatgaatacacccgattcaggttag
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