Lactuca sativa (garden lettuce): 111888240
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Entry
111888240 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111888240 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111888240
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111888240
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111888240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111888240
NCBI-ProteinID:
XP_023740137
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Position
9:complement(219170116..219171974)
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AA seq
309 aa
AA seq
DB search
MIRNPNFQVRKRKWTTVLFLLRKRKRKNEESHQDGVKHPKIVEIFDGNEGDDDHHHENDH
YRSDGSDADERDENPRDNSDEKIEGFEQENPSLDLMQEDEQENSKSALLIVSERKKHGGD
TDTPPDDDCCPICFDDFSIACKTNCGHWFCANCILQFWTYRTALQKCNCPICARPITELT
PEASLLIIHEVEVIEALKNVQRYNRLFQGGFSGVIWKVFEVPDVFRRMLSGLMDPDRFRG
NYYAMRIFALLMSCIYNMSSFDFIPTGTIGVRRLFDICAIALVVILCLIGICHRLVLRRR
VRQLAATQL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaaaccctaatttccaggtgaggaagaggaagtggacgacggttttgtttctg
ctaagaaagaggaaaagaaagaatgaagaatctcaccaagacggcgttaaacatcctaaa
attgttgagatttttgacggaaatgaaggagatgatgatcatcatcatgaaaatgatcat
tatcgctccgatgggtctgatgctgatgagagagacgaaaaccctagagataattccgat
gaaaaaattgaaggttttgaacaggaaaaccctagtttagatctgatgcaggaggatgaa
caagaaaactcaaagtctgcgttattgattgtttccgagaggaagaagcatggtggagat
acagatactcctcccgacgatgattgctgtccaatctgcttcgatgatttctcaattgcc
tgtaaaacaaactgtggacactggttttgtgcaaattgcatactccaattctggacatac
agaacagctcttcaaaaatgcaattgcccaatttgtgcacgacccattaccgagttgaca
ccagaggcatctttactgattatccatgaagttgaagtcatcgaagctctaaaaaatgtt
caaaggtataaccgccttttccagggtggttttagtggtgtcatatggaaagtttttgag
gttcctgatgtatttagaagaatgttatctggtttgatggatccagatagattcagagga
aactactatgcaatgcgtatctttgctttgttgatgtcctgcatttataatatgagttcc
tttgacttcattccaacagggactataggggtaaggaggttgtttgatatttgtgctata
gcactagttgtaatcctgtgtttgattggcatatgccatagattggtgcttagaagacgt
gttaggcaacttgcagctactcaattataa
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