Lactuca sativa (garden lettuce): 111888263
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Entry
111888263 CDS
T05352
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33
KO
K12896
serine/arginine-rich splicing factor 7
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111888263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111888263
Spliceosome [BR:
lsv03041
]
Common components
Common spliceosomal components
SR proteins
111888263
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
Motif
Other DBs
NCBI-GeneID:
111888263
NCBI-ProteinID:
XP_023740170
LinkDB
All DBs
Position
2:211439570..211442677
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AA seq
318 aa
AA seq
DB search
MPRYDDRHGSTRLYVGHLASRTRSRDLEDIFSRYGRIRDVDMKRDFAFVEFSDARDADDA
RYSLNGRDVDGSRIVVEFAKGAPRGGGGGGRDGGGRDGGGRDGGSREFLGRGPPPGSGRC
FNCGLDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPKKVNADSRRGRSYSRTPSPPR
RGRSRSRSFSRSRSYSQSRSPVKRERERERSIERAERRSRSPRRHRGASPPPSKGRKRSS
SPSPDDRTAALQPSRSPSPSPRRPKSRSPMEGDDGVPVEENGHSRSPSPAPRGNGGTGTP
VEEDDDVNNASPEGSESG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgatgatcgccatggcagcactcgtctctatgttggccacctggcttca
cgtacaagatcgcgtgatttggaagacatttttagcagatatggaagaatacgcgatgtg
gatatgaagcgcgactttgcctttgtggaattcagcgatgcaagagatgctgatgatgca
agatatagcttaaatggtcgtgatgttgatggaagccgaatagtggtggagtttgctaaa
ggggctccacgtggcggtggcggcggcgggcgtgatggtggtggtcgtgacggtggtggc
cgtgatggtggttctcgtgagtttcttgggagaggtcctccaccggggtcagggcggtgc
tttaattgtgggcttgatgggcattgggctcgtgactgtaaagctggtgattggaagaac
aaatgctatcgatgtggtgaacgtggtcatatagaaaggaattgtcaaaatagcccaaag
aaagtcaatgctgatagcaggcgtggaagaagttactcgcggaccccatcgccacctagg
cgtggaagaagccgcagtcgtagttttagcaggagtcgcagctacagccaatcaaggtca
cctgtaaagcgggagagggagagagagaggagcattgaacgtgcagaaagaagatcgaga
agcccaaggagacacaggggggcttcaccaccaccatcgaaagggaggaagcgcagcagc
agcccatcgcctgatgacagaaccgccgccctgcaaccatcacgatcaccatcgccgtca
ccaaggcggcccaagagtaggagtcccatggagggtgatgatggtgtccctgttgaagaa
aatggacacagtaggagccctagccctgctcctagaggcaatggtgggactgggacacct
gttgaggaggatgatgatgtcaacaatgcttcaccagaggggagtgaatctggttaa
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integrated database retrieval system
