Lactuca sativa (garden lettuce): 111888394
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Entry
111888394 CDS
T05352
Name
(RefSeq) probable galacturonosyltransferase 3
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00520
Amino sugar and nucleotide sugar metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111888394
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsv01003
]
111888394
Enzymes [BR:
lsv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
111888394
Glycosyltransferases [BR:
lsv01003
]
Polysaccharide
Structural polysaccharide
111888394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Fe_hyd_lg_C
Motif
Other DBs
NCBI-GeneID:
111888394
NCBI-ProteinID:
XP_023740349
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Position
3:complement(65961621..65965774)
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AA seq
684 aa
AA seq
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MKALCRRLTNSSSRVILFIFLVPLHITLVGADAFDTLTIQKEINGHQPLFDCPQCIDKKE
QANTSSVTAGNHQVEKDIDIIVTYTDTSGAIRIKTIKSKDLSPSWVWKNPIDDNQVKEES
KLHTLKDQPDTRIEANNEFFADVNKQPHKPLFPVHPTKLRRQALRQERRDRRTAELIQIG
EKRDIQIQEAAIERAKNFDIHVKAKYSIWRREYESPNSDSTVKLMRDQIIMAKAYASIAK
AKNATGIYDSLIKHSKRSQQAIGEATYDSELNPSAVDRAKEMGHILSLAKDQFYDCILMA
RKLRVMLQSTESNVEEVKKKSASLTQLAAKTVPKPLHCLPLVLTTDYFLLSEKEKNFPES
KNLEDPNLYHYAIFSDNVLATSVVVNSTVLHAKEPEKHVFHIVTDKLNFAAMKMWFLVNP
PGKSTIQVQNVDEFTWLNASYCPVLRQLESSRMKEYYFKAHQTSTLTAGSDNLKYRNPKY
LSMLNHLRFYLPQVYPKMEKILFLDDDIVVQKDLTPLWSVDLGGMVNGAVETCKESFHRF
DKYLNFSNPKISDNFDPYACGWAFGMNMFDLNEWKKRDITGIYHGWQNMNEERTLWKLGT
LPPGLITFYNLTHPLERSWHVLGLGYDPALNQSEIKNAAVVHYNGNYKPWLDLAIAKYRS
YWSRYVKFDNPYLQLCNINSFMLS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctatgtagaagattaacaaattcttcatctcgtgttattctattcattttc
ctggtcccacttcacattactttagtaggagcagatgcatttgacactttaactattcaa
aaagagattaatggtcatcaacccttgtttgactgtcctcagtgtatagataagaaggaa
caagctaacacaagctctgtgacagctggaaaccatcaagtggagaaggatattgacata
atagtgacatacacagacacttctggtgccatacgtattaaaaccatcaagtccaaagat
ttatctccttcatgggtctggaaaaatcccattgatgacaatcaggtcaaagaggagtca
aagttacatacactaaaagatcagcctgacacaagaattgaagccaacaacgagtttttt
gcagatgtaaacaaacagccacataaaccattgtttccagtgcatccaacaaagctcagg
cgtcaggccttacgccaggaaagaagggatcgtcgaactgcagagttgatccaaataggc
gaaaagagggacattcaaatacaggaagctgccattgaacgtgctaaaaactttgacata
catgtcaaagctaaatacagtatttggagacgagaatatgaaagccctaattccgattcc
actgttaaactcatgcgtgaccaaattataatggcaaaagcatatgcaagtattgcaaaa
gccaaaaatgcaactggaatctatgattccctaattaaacattccaaaagaagccaacaa
gcaatcggagaagccacttacgatagcgaacttaacccaagtgcagttgaccgggctaaa
gaaatgggacatattctatccttggcaaaagaccaattttatgattgtattttaatggca
agaaaattaagggttatgcttcagtcaaccgagtcaaacgttgaagaagtgaagaaaaag
agtgcatctttaacacaattagctgcaaaaactgtacctaaacccttacattgccttcct
ttagttctcacaacagattatttcttgctaagtgaaaaagaaaagaactttccagaaagc
aagaatcttgaagatccaaatctataccactacgcgatattttccgataatgtccttgca
acatctgtagttgtgaattcgactgttttacacgcaaaagagcctgaaaaacatgttttt
catattgtgacagataagttaaactttgcagccatgaagatgtggtttttggtcaaccct
ccaggaaagtcaacgatccaggttcaaaatgtggatgagtttacttggttgaatgcttct
tattgccctgttcttcgtcagcttgaatcctctaggatgaaggagtattattttaaggcg
caccagacatcgactttgacagctggatcggataatttgaaatataggaacccgaagtat
ttgtcgatgttgaatcatttgagattttatcttcctcaagtgtacccaaagatggagaag
atattgtttttggatgatgatattgtggttcagaaggatttgacacctttatggagtgtt
gatttgggagggatggtgaatggtgctgtggagacgtgtaaggagagttttcatcggttt
gataagtatttgaatttttctaaccctaaaatttcggataattttgatccgtatgcttgt
ggttgggctttcgggatgaatatgtttgatttgaatgagtggaagaaacgcgatataact
ggaatttatcatggctggcaaaatatgaatgaggaaaggactctgtggaagcttgggacg
ttgccacctggactgataacattttataacctgacgcatccattggaaaggagctggcat
gtgttggggcttggatatgatccggctcttaaccaaagtgaaattaagaatgcggctgtg
gtacattacaatgggaactataaaccatggttagatcttgcgattgctaagtacaggtct
tattggtctaggtatgtgaagtttgataatccgtatcttcaactttgtaacattaacagc
ttcatgttatcatga
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