Lactuca sativa (garden lettuce): 111888712
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Entry
111888712 CDS
T05352
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111888712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111888712
Membrane trafficking [BR:
lsv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111888712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_14
TPR_8
TPR_19
TPR_7
TPR_9
TPR_12
TPR_20
PPTA
E217_gp28
NGF
ARM_TT21_5th
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
111888712
NCBI-ProteinID:
XP_023740607
LinkDB
All DBs
Position
5:complement(1043783..1051510)
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AA seq
739 aa
AA seq
DB search
MAMRELVTGGAACAVPGSSSSSNPLGALANALIGSSSQKERLQEIPTSTLNTSGSGSGIY
SGGGEPLSALPGSELEHPLQHEGSGFINGFHAANDQTQRLGEIWDGIQNPHFPGIQGQTN
FPLHQLQPELNGPPQRVLSSFLHSFVNSSHGGVPFGPTQLPVLGLSEGDKRCIRDRSSIM
ARHIFADKTEDFINGQVNALLSSLEIDNHGGLVREHMPGRYAELDQYWGESQVMGPRPHA
DGWADEFSQQHGGDPNAWALSFERQHGAGGWASEFQHEQTQMTSVDRMAGANIPSLAAME
QTRMLAHTLAQNTNPKFQNSKFLQFVSKMSRGELTIEDNQVRPATGDWANEYQQQYNAGP
SSTSWADQYAREEVSRAPDRWADEFANERVHHGPVDEQWVNEFSKLEVNDWADEFGRQVG
EGILGDDSADNWASAYDEYLNEQAVMKQKSESSRGVYVFSDLNPYVGHPDPLREGQELFR
KGLLSEAVLALEAEVLKNPENAEGWRLLGVAHAENDDDQQAIASMMRAHEADPTNLEVLL
ALGVSHTNELEQQAALKYLYSWLRQHPEYGKIAPPQLSDSLYYADVARTFNEAAQMSPED
ADVHIVLGVLYNLSREYDKAIESFQTALKLKPRDYSLWNKLGATQANSVQSADAIYAYQM
ALDLKPNYVRAWANMGISYANQGMYEDSIRYYVRALAMNPKADNAWQYLRISLSCASRND
MMEACDSRNLDVLQKEFPL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagggagttggtcacgggtggggccgcgtgtgcggtgcctggttcttcttct
tcatcaaaccctcttggtgctctcgccaacgcccttatcggctcttcctctcaaaaggaa
aggttgcaggagattcctacatcaacactgaatacgtctgggtctggcagcggtatctac
tcaggagggggagagcccttgtcagctcttcctggatcggagttggaacatcctctgcag
catgagggctcagggttcattaatggtttccatgctgcaaatgaccagacccagaggctt
ggtgaaatttgggatggaatacaaaatcctcatttccctggaatacaaggtcaaaccaac
ttccctctacaccaacttcaaccagaattaaatggtccacctcaaagagtattgtcaagc
tttttgcattcatttgttaatagcagtcatggtggagttccttttggtcccactcaactg
ccggtgttgggtttgtctgaaggggacaaacgctgcatacgtgaccgcagcagcataatg
gctcggcatatctttgctgacaagactgaggatttcatcaatggccaggtgaatgctctg
ttatcttctttagagatcgataatcatggggggttggttagggagcacatgcctggtaga
tatgcagagctggatcagtattggggggagtcgcaagtcatggggcccaggccccatgca
gatggctgggctgatgaattttcccaacaacacggtggggacccgaatgcttgggcttta
tcctttgaacgacaacatggtgctgggggttgggcttctgaattccagcatgagcaaacg
cagatgacgtctgtggaccgaatggcaggtgcaaacattccatctttggctgctatggag
cagacccgaatgctagcacacactttagctcagaacaccaatccaaagtttcagaactcc
aagttccttcagtttgtttcaaagatgagtcgtggggaattgactattgaggataaccag
gtcaggcctgcaactggggactgggcaaatgaatatcaacagcaatataatgcaggccct
tcctctacctcttgggcagatcagtatgcacgtgaagaggtttctagggctcctgatagg
tgggcagatgaatttgctaacgaacgtgtgcatcatggcccggtagatgagcagtgggtc
aatgaattttcaaagttggaagtcaacgactgggcagatgaatttggtcgccaggttggt
gaaggcattctgggagatgattctgctgataattgggcatctgcatatgacgagtactta
aacgaacaagctgttatgaagcagaaatctgagagttcaaggggggtgtatgtattttct
gatttaaatccttatgttgggcatcctgatcctttgagggaaggccaggagctgttccgt
aaaggtctgttaagtgaagcagttcttgctttagaggccgaagttttgaagaatcctgag
aatgctgaaggttggaggttgcttggtgtagcacatgctgagaatgatgacgatcaacag
gcaattgcatcaatgatgcgtgcacatgaagctgaccccaccaatctggaggttcttctt
gcactaggagtcagccatacaaatgaattggaacaacaagctgcattgaaatatttgtat
agttggctgcgccagcatccagagtatgggaaaatcgctcctcctcaactctccgattca
ctctactatgctgatgttgctcggactttcaacgaggcagctcaaatgtcacctgaggat
gcagatgtacacatagtactcggtgtcttgtataacctttcaagagaatatgacaaagcc
attgaatccttccagacagctttaaagctcaagccaagagattactcattatggaacaaa
cttggggcaacacaagcaaacagtgttcagagtgctgatgcaatatacgcataccaaatg
gcattggatttgaagccgaattatgttcgcgcatgggcaaacatgggtattagttatgca
aaccagggcatgtatgaggactctattcgctactatgtgcgtgcactagcaatgaatcca
aaggcagataatgcctggcagtacttgagaatttctctaagctgtgcttccaggaatgat
atgatggaagcttgcgactcccggaatcttgatgttcttcaaaaggaatttccgttataa
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