Lactuca sativa (garden lettuce): 111888744
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Entry
111888744 CDS
T05352
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2
KO
K03265
peptide chain release factor subunit 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111888744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111888744
03012 Translation factors [BR:
lsv03012
]
111888744
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111888744
Translation factors [BR:
lsv03012
]
Eukaryotic type
Release factors
111888744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
111888744
NCBI-ProteinID:
XP_023740626
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Position
2:complement(24145649..24147047)
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AA seq
457 aa
AA seq
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MAADDSDNNVEIWKIKKLIKALEAARGNGTSMISLIIPPCDQISRVTKMLGDEFGTASNI
KSRVNRQSVLGAITSAQQRLKLYNKIPPNGLVLYTGTIVTSDEKEKKVTFDFEPFKPINS
SLYLCDNKFHTEALKQLLESDDKFGFIVIDGNGTLFGTVSGDTKEVLHKYTVELPKKHGR
GGQSALRFDRIRMEKRHNYVRKTAELATQFYINPATNQPNVSGLILAGCADFKTELSQSD
LFDHRLQEKILNVVDVSYGGENGFNQAIKLSSEILANVKFIQEKRLIGKYFEEINLDRGK
YVVGIDDTLEALHMGAVETLLVWENLEINRHVLRNNVSGEIVIKYLNKEQETDGSNFRDS
VSDAELVVEENMSLIEWFVNEYKRFGCKLEFVTNKSPEGLNFCRGLGGIGGILRYQLLIH
SFDELSDDGENNDIENSDDGESYDNENHDDGENYNAE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggatgactctgataacaacgttgagatatggaagattaagaagcttataaag
gcactagaagctgcaagaggcaacggaaccagcatgatatctctgattatacctccatgt
gatcaaatttctcgagtaaccaaaatgctcggtgatgaatttggaactgcttcaaacatt
aagagcagagttaatcgtcaatctgtgttaggcgctataacatctgcccagcagaggctc
aagctctacaacaagataccaccaaatggactcgtgctctacacaggaacaatagtaaca
agtgacgagaaagagaaaaaagttacatttgacttcgagcctttcaaacctataaactca
tctctatatctctgtgataacaaattccacacagaagctcttaaacaactgttggaatcg
gatgacaagtttggtttcattgtcatcgatggtaatggtaccctctttggaacagtaagt
ggcgatactaaggaggttctacacaagtataccgttgagttgccaaagaaacatggaaga
ggagggcaatcagctttgagatttgatcgtattcgtatggagaaacgtcacaactatgta
aggaagacagcagagcttgcgacacagttttatatcaatcctgctactaatcagcctaat
gtttctggacttatacttgctggatgcgctgatttcaagactgagctcagtcaatctgat
ttgtttgaccatcgtcttcaggagaaaatcttgaatgttgtcgatgtctcttacggaggt
gagaatggtttcaatcaagcaattaagttgtcgtcagagattcttgccaatgtgaagttc
attcaggagaagcgtttgattgggaagtattttgaggagataaatcttgatagggggaag
tatgtcgttggaattgatgacactttggaagctttacacatgggtgctgtggaaacactg
cttgtttgggaaaatcttgaaattaatcgccatgttttaagaaacaatgtttctggtgaa
attgttataaagtatttaaacaaggaacaggagactgatgggagtaattttagggattca
gtcagcgatgctgaacttgtagttgaggaaaatatgtctctgattgagtggtttgttaat
gagtacaaaagatttggctgtaagcttgagtttgtcacaaacaaatctccagaggggtta
aatttttgtagaggccttggtgggattggtggcattcttcgttatcagcttcttattcat
tcatttgatgagctgtctgatgatggagaaaataatgacatcgaaaattctgatgatggg
gaaagttatgataatgaaaatcatgatgatggggaaaattataatgctgaatag
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