Lactuca sativa (garden lettuce): 111888816
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Entry
111888816 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111888816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111888816
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111888816
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111888816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
Rad50_zn_hook
DUF7567
PHD_2
Motif
Other DBs
NCBI-GeneID:
111888816
NCBI-ProteinID:
XP_023740699
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All DBs
Position
2:complement(233674759..233676641)
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AA seq
321 aa
AA seq
DB search
MDLDNIECVSSSNRVEGAEIQNFGPKPRNNTGMPPATSVHELLECPVCTGSMYPPIHQCL
NGHTLCSTCKTQVHNRCPTCRQELGDIRCLALEKVAESLELPCRYYSLGCPETFPYYSKL
KHEMSCNFRPYNCPYAGSECSVTGDIPFLVTHLRDDHKVDMHTGCTFNHRYVKSNPREVE
NATWMLTVFNCFGEYFCLHFEAFQLGVAPVYMAFVRFMGDEVAARNYSYSLEVGGNGRKL
IWEGTPRSIRDSHRKVKDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQQQTNTT
TTTTTDAAAGVLCIPIPNQFI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggatttggataatatagagtgtgtatcatcttccaatagagtagaaggtgcagagatc
caaaatttcggtccgaagcctcgtaataacacgggaatgcctcctgctacaagtgttcat
gaactgttggagtgcccagtttgcaccggttcaatgtaccctccaattcatcagtgtctg
aatgggcacacgttatgctcgacctgtaaaacacaagtgcacaaccgatgcccaacttgc
agacaagaactgggagatatcagatgtttagcattggagaaagttgcagaatctcttgaa
ctcccatgcagatattactcattaggatgcccagaaacattcccgtattacagcaagctg
aaacacgaaatgtcatgcaacttcagaccttataactgcccatacgctggatcagaatgc
tcagtcacgggtgatattccttttcttgttacacatctgagagacgaccataaagtagac
atgcacacaggctgtacctttaaccatcgttatgttaaatctaacccacgtgaagttgaa
aacgccacctggatgctgactgtgttcaattgttttggagagtatttctgtctgcatttt
gaagcgtttcagttgggagtggcgcctgtgtacatggcgtttgtgcggtttatgggtgat
gaggtggcggctcgaaactacagctacagtttagaggttggagggaatggaaggaagctg
atttgggaaggaacaccgaggagcataagagatagtcataggaaggtgaaggacagtcat
gatgggctcataatacagagaaacatggcactttttttctcaggtggtgacaggaaggag
ctcaaactcagagttacagggaggatatggaaagaacaacaacaacagaccaatactact
actaccactactacagatgctgctgctggggtgctctgcatacccatacccaaccaattt
atatga
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