Lactuca sativa (garden lettuce): 111888858
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Entry
111888858 CDS
T05352
Name
(RefSeq) acidic endochitinase SE2
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00520
Amino sugar and nucleotide sugar metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
111888858
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
111888858
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
111888858
NCBI-ProteinID:
XP_023740752
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Position
2:complement(232404609..232405687)
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AA seq
299 aa
AA seq
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MASSSYSQSTSALLVLLSIVAFSFFKPLEAAGIATYWGQRTDEGTLAAACATGNYQFVNI
AFLTTFGNGQTPVLNLAGHCDPASTCSSLSSDIRACQNQGVKVFLSLGGAVGSYSLSSPQ
DAQQVSDYLWNNFLGGQSNSRPLGDAVLDGIDFDIESGSGQFWPDLARALAAHNSEKKVY
LSAAPQCPIPDAHLDSAIQTGLFDYVWVQFYNNPQCEYGANADALLARWNQWTQVNSNQI
FLGLPAATGAAGSGYIPPDVLTSSVLPSIKGSAKYGGVMLWDRFFDQQNGYSAAIKNSV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatccagttactcacagtcgacatcagcattgctcgtactcctttccatcgtt
gctttctctttcttcaaacccttagaagctgctggcatagccacttactggggacaacgc
accgatgaagggaccctagccgccgcctgcgccaccggaaactaccagttcgtaaacatc
gctttcttgactaccttcggaaatggccaaacaccagttctaaacctggccggtcactgt
gatcctgcctccacttgctccagtttatcctccgatatacgagcatgccagaaccaaggg
gtgaaggtgtttctttctttaggaggagccgtcgggagctactccctatcatcccctcaa
gatgcacaacaagtttccgattacctatggaacaactttcttggtggccagtcgaattcc
cggccgttaggtgacgctgttttggacggaatcgactttgacatcgagtccggatcagga
caattctggccggacctagctagggcattggccgctcacaactcggagaaaaaggtttac
ttatctgcagcgccgcagtgccctatcccagacgcccatctggattcagcaatccagacc
ggcttattcgactacgtctgggtgcagttctataacaatcctcagtgcgagtacggagca
aacgctgatgctttattagctcgatggaaccagtggactcaggtcaactccaatcagatt
ttcttgggtctgcccgcagccaccggagctgccggaagcggatacattccgccagatgtt
cttacgtctagtgttcttccatcgatcaagggttctgccaagtatggtggggttatgttg
tgggacaggttctttgatcaacaaaatggatacagtgcagctatcaaaaacagtgtttga
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