Lactuca sativa (garden lettuce): 111888871
Help
Entry
111888871 CDS
T05352
Name
(RefSeq) vacuolar protein-sorting protein bro1 isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111888871
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111888871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
ALIX_LYPXL_bnd
TEX13
Motif
Other DBs
NCBI-GeneID:
111888871
NCBI-ProteinID:
XP_023740773
LinkDB
All DBs
Position
2:complement(188320923..188324201)
Genome browser
AA seq
467 aa
AA seq
DB search
MGSAFNPQILVEKLTKLNNSQQSIETLSHWCIFHMNKAKQVVETWARQFHSSPRDQRLAF
LYLANDILQNSRKKGSEFVGEFWKVLPDALRDVIDNGDEFGRNSALRLVTILDERKVFGS
RGQVLKEELVKRHMETSNRNGKHSGLKLKQPAGNAVDKIVSGYKVIYGSQVNEDAVFSKC
KNAITCVEKVEKEIGGDIRSVNGTGVTDELKGQHATLRDCIEQLTVIESSRTNLVSYLRE
ALQDQEMKLDKVRSQLQAAHSQAEKADNYCRQLLNPNGRQPPPVPVTGEQSAPVMYTQQP
PFTDQSEDTKSAAAAVAAKLTASTSSAEMLTYVLSSLASEGVIGNSPSNDYPLQKRTKIN
NGEPPAPPFQYPDQQPPPPSSPPPPPPMPPMQPYPAPVYMVSAGTVTYGHTMNQPPPPPP
QPMAGPLVNGVSLYTPGIVPDGYQNYQMEGGFYSQQSAMSMAPMSRQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcgcgtttaatccacaaattttggtggagaagctgactaagctcaacaattca
cagcaaagcattgagactctgtcacattggtgtatatttcatatgaacaaggcaaaacaa
gttgtggaaacatgggctagacaatttcatagctctccacgtgatcaacgcctggctttt
ctgtatcttgcaaatgatattttacaaaatagcaggaaaaaaggttctgaatttgttggt
gaattctggaaggttcttccagacgcactccgtgatgtcatcgacaatggggatgaattt
ggaagaaattctgctttacgcctcgtcactattttggatgaaagaaaggtttttggttca
cgagggcaagttcttaaggaagagcttgtcaaaaggcatatggaaactagtaataggaat
gggaagcattcagggttaaaattgaaacagccagctggcaatgcagtggacaaaatagtt
tcagggtataaagttatatatggtagtcaggtcaatgaagatgcagtcttcagcaaatgc
aaaaatgccattacttgtgttgaaaaagtggaaaaggaaattggtggggatattagatct
gtaaatgggacaggtgtcacagatgagctcaaggggcagcatgctacattgagggattgt
attgagcaacttacagttattgaatcatcaagaacaaatcttgtgtcttatttgagggaa
gctcttcaagatcaggaaatgaagctggacaaagtccgaagtcagcttcaggctgcacat
tctcaagcagaaaaagctgataattattgtaggcaattgcttaaccctaatggcagacaa
ccgccacctgttccggtgaccggagaacagtctgctccggtgatgtacacacaacaacca
cctttcaccgaccaatccgaggacaccaaatctgccgccgctgcagtggcggcaaagctc
acggcatcaacatcatccgccgagatgctgacttacgtcctctcgtccctggcttccgag
ggcgttattggaaattcaccctcaaatgactaccctttgcaaaagagaaccaagataaat
aacggtgaaccaccagctccaccattccagtatccagaccaacaaccgcctccaccatca
tctccgccacctccaccgccaatgccgccaatgcagccatatccagctccggtgtacatg
gtgtcagctgggacagtaacatatggccataccatgaaccaaccgccaccgccaccacca
caacctatggctgggccgctagtgaatggtgtttctttgtatacaccgggaattgttcca
gatggttaccagaattatcaaatggaaggtgggttttatagccaacaatcagccatgtca
atggcacctatgtctaggcagtag
DBGET
integrated database retrieval system
