Lactuca sativa (garden lettuce): 111888899
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Entry
111888899 CDS
T05352
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111888899
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111888899
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111888899
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111888899
NCBI-ProteinID:
XP_023740805
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Position
2:233251401..233255434
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AA seq
713 aa
AA seq
DB search
MNPRPEKFVRFQDLRSENSSSGGSSGRLKTALGSVSEMFRKGLEHGSGGIKSLKRSMESH
SFKRIVSRGLGSWKNTLNPQGKFLQKWNKIFVLSCVIAVSVDPLFFYIPIVIDDKKCLDL
DKKLQITASVLRSFTDIFYIVHIIFQFRTGFIAPSSRVFGRGVLVENSWEIAKRYMSSYF
LVDILAVLPLPQIVIWLVIPKMHGSRSLNTKNMLKFVVVFQYIPRMLRIYPLYKEVTRTS
GILTETAWAGAAFNLLLYMLASHVFGAFWYLFSVERETTCWEEACKNTTGKNITNCSRSW
FSCGNQSHPVEYLNSSCPIIEMENPPYDFGIFLPALQSGVVNSLDFPQKFFYCFWWGLQN
LSSLGQNLQTSTFVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTIRLEEMRVKRRDAE
QWMSHRLLPEPLKERIRRYEQYKWQETRGVDEDNLIRNLPKDLRRDIKRHLCLKLLKRVP
MFEKMDDQLMDAMCDRLKPVLYTEDSYIVREGDPVDEMLFVMRGKLLTVTTNGGRTGFFN
SDYLRAGDFCGEELLTWALDPHTSSNLPISTRTVQALEEVEAFALMADDLKFVASQFRRL
HSKQLRHTFRFYSQQWRTWAACFIQAAWRRRCRKKLEDSLREEEDRLQNALTGGGGGSGS
SPSLGATIYASRFAANALRALRRNGARKARIPDKLPPLMLQKPAEPDFTSEDK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcgacctgagaagtttgtgaggtttcaggatttgagatcagaaaatagcagc
agtggaggttcttcagggagattgaaaacagcattgggttcagtttctgagatgttccgg
aaaggtctagaacatggttcgggagggattaaaagcctgaaacgatcaatggaatcccat
tccttcaagagaatcgtgagcagaggccttggttcttggaagaatacacttaaccctcaa
gggaaattccttcagaagtggaacaaaatatttgtgttgtcatgtgtgattgctgtttct
gtagatccattattcttttatattcctatagttatagatgacaagaagtgccttgatctg
gacaagaagttgcagatcacagccagtgtattgcggtccttcactgacatcttctacatc
gttcatatcatctttcagtttcgcactggttttatagctccttcttcacgggtatttggt
aggggtgttcttgttgaaaattcttgggagattgcaaagagatacatgtcttcttacttt
ctggttgacattcttgcggttcttccattgccacagattgtgatttggttggttataccg
aagatgcatgggtcaagatctttgaatacaaaaaacatgttgaagtttgttgttgtgttc
caatatatccccaggatgcttcgaatctatcctctttataaagaggtcacaagaacttct
ggcatacttactgaaaccgcatgggctggagctgctttcaatctcttgctttacatgctc
gctagtcatgtattcggggcattttggtatttgttttctgttgaacgtgaaacaacctgc
tgggaagaggcgtgtaaaaatacaaccgggaaaaatataacaaattgttcccgttcttgg
ttttcttgtggtaatcaatcgcatcctgttgagtatttgaattcaagctgccccataata
gaaatggaaaaccctccttatgattttggaatctttcttcctgcccttcaatccggtgtt
gtcaactcacttgattttccacagaagtttttttactgtttctggtggggtctgcaaaac
cttagttctctcggtcaaaaccttcaaacaagcacctttgtgtgggaaatttgctttgcg
gtgttcatttctatatctggtttggttttattctcgtttctcatcggaaacatgcagaca
tacctgcaatctacaacaataagattggaggagatgagggtgaaaagacgagatgcagag
cagtggatgtcccaccggttgcttccggaacctctcaaggaacgaatcagaagatacgaa
caatataaatggcaggaaacaagaggtgttgatgaagataatttgatccggaaccttccc
aaggaccttagaagggatataaagcgccatctttgtttgaaactgctaaaaagggtgccg
atgtttgaaaaaatggatgatcagttgatggatgcgatgtgcgaccgtttgaaaccggtg
ttgtatacggaagatagttatatagtgagggaaggggacccggttgatgagatgctgttt
gtaatgcgtgggaagttattgacagttacaacaaacggtggtaggaccggtttcttcaac
tctgattatctgagagcgggtgatttttgtggtgaagagctgctgacttgggccttggat
ccccatacatcatcaaacctccccatctccacaagaacagtccaagcacttgaagaagtc
gaggcctttgctctcatggcagatgacctcaaatttgtagcttctcagttccggagactt
cacagtaagcagctgcgccacactttcagattctactcccagcaatggcggacgtgggcc
gcttgtttcatacaggcggcatggcggcggcgttgcaggaagaaactggaagattccctc
cgggaagaagaggataggctgcagaacgccttgaccggaggtggtggtgggagtgggagt
tcccccagtttgggtgccacaatctatgcatcaagatttgcagccaatgcccttcgtgct
ttaaggcggaatggtgcaaggaaagcaaggattcctgacaagctgcctccattgatgctt
cagaagcctgcagagcctgatttcacttccgaagataaatga
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