Lactuca sativa (garden lettuce): 111889396
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Entry
111889396 CDS
T05352
Name
(RefSeq) DNA gyrase subunit B, chloroplastic/mitochondrial
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111889396
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111889396
Enzymes [BR:
lsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
111889396
DNA replication proteins [BR:
lsv03032
]
Prokaryotic type
DNA Topoisomerases
111889396
DNA repair and recombination proteins [BR:
lsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
111889396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
TOPRIM_C
Motif
Other DBs
NCBI-GeneID:
111889396
NCBI-ProteinID:
XP_023741310
LinkDB
All DBs
Position
5:322081878..322086364
Genome browser
AA seq
734 aa
AA seq
DB search
MALLKPHHSTYYNSLRLIMSTRFWLPTHSLCISSVRLSQPSVLLKPRSNLGARTLSTNRV
LFPSPLLTPRAFKSSSLSSVADALKEKDGSENYGSENIQILEGLDAVRKRPGMYIGSTGF
RGLHHLVYEILDNCVDEAQAGFASKVDIVLLADGSVRITDNGRGIPIDIHPGSKKSGVET
VLTVLHAGGKFGGASSGYKVSGGLHGVGLSVVNALSETLEVTVWRDNKECHQSYIRGKPL
KPLAYEDLPPDADQHTGTRIKFRPDPEIFTSGMEFDYDTIAARVRERAFLVPGLTITLKK
EDNDPEKCRSDEYCFAGGLVEYVKWLNADKQPLHDILSYRKEADGTTIDVAFQWCSDAYS
DTMLGYANSIRTVDGGTHIDGIKASLTRTLNNLGKKSKLIKEKDISLSGEHVREGLTCVI
SVKLPNPEFEGQTKTRLGNPEVRKIVDSSLQEFLTEYLELNPDVLDKILSKSLNALKAAL
AAKRARDLERQKSVLKVSSLPGKLADCSSTDPEIAEIFLVEGDSAGGSAKQGRDKNFQAI
LPLKGKILNVERKDEAAMYKNEEIQTLIRALGLGVKGEDFKKDGLRYHKIIILTDADVDG
AHIRTLLLTFFYRYQRALFDEGCIYVGVPPLYKVERGKQAFYCYDESELKTLQSSFPSNA
SYTIQRFKGLGEMMPLQLWETTMDPKTRLLKKMVVEDMAEANVTFSSLMGARVDARKEMI
KNTAKKMDLKNLDI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcttaaacctcatcattcaacctattataattctcttcgtttaatcatgtca
acaaggttctggctacccacgcatagcctctgtatctcctctgtccgcctttctcaaccc
tctgtcctcctaaaacccaggtcaaatttgggagcgaggacactatcgacgaacagagtt
ttgtttccaagtcctttgctaaccccaagagcttttaagtcatcgtcattaagttccgtt
gccgacgcccttaaagaaaaagatggttcagaaaattatgggtctgaaaatattcagata
ttagaaggtttagatgctgtgaggaaaagacctggaatgtacattggaagcacgggtttc
cgtggtcttcaccatctggtttacgaaatattggacaattgtgtcgatgaagcacaagca
ggatttgcctcaaaggttgatattgttctacttgcagatggctcagtgcgcatcactgac
aatggacgcgggataccaatcgacatacatccaggctcaaaaaagtcaggagtggagact
gtgttgactgttttacatgctggtggaaaatttggtggggccagtagtggttataaagtc
tcaggtggactacatggtgtaggtttatcagtagttaacgcattatctgagacattagaa
gttacagtttggagagataacaaggaatgtcatcaaagttatattcgtggaaagcctctt
aaacctttagcatatgaagatcttccacctgatgcagatcaacatacaggaacacgcata
aaatttaggcctgaccctgaaatattcacatctggaatggagtttgattatgatactatt
gctgcacgtgtcagggagagagctttcctagtccctgggctaactattactctcaagaaa
gaggataatgatcctgagaagtgtcgatctgatgaatattgctttgctggaggacttgta
gagtatgtgaagtggctaaatgctgataagcaaccacttcatgacattttgagctataga
aaagaagcagatgggaccactattgatgtagctttccaatggtgttcagatgcgtattca
gatacaatgcttgggtatgctaacagcatacgtacagttgatggtgggacccacatagat
ggtataaaagcttcattaacaagaactcttaataaccttggaaagaagtcaaagcttatc
aaggaaaaagatatcagtttaagtggtgagcatgtgagagaagggttgacttgtgtaata
tcagtcaaacttccaaatcccgagtttgaaggccaaacaaagacaagattaggaaatcca
gaagtgagaaagattgttgattcttcacttcaagaattccttactgaatacttggagctg
aatcctgatgtacttgacaaaatcctctccaaatccctcaatgctttaaaggcagctcta
gcagcaaagagggcaagggatttggagagacagaagagtgttttgaaagtgtcatctctt
ccaggaaaacttgcagattgttcatccacagatcctgaaatagctgagatatttctagtt
gaaggagactcagcaggtggaagtgctaaacaaggtcgtgataagaactttcaggctatt
cttccattaaagggtaaaattttgaatgttgaaagaaaagatgaagctgcaatgtacaag
aatgaagagattcaaaccctaattcgtgcccttggacttggagtcaagggtgaggatttc
aaaaaagatggtctaagataccataaaatcatcatcttaactgatgcagatgttgatggt
gctcatattcgtacattattgttaacatttttctatagatatcagagagctttatttgat
gaaggttgcatatacgttggtgttccacccctatataaggtagagagggggaagcaagca
ttttactgttatgatgaatcagaacttaaaacccttcagagttccttcccttcaaatgca
tcatatactattcaaaggttcaaagggttgggtgaaatgatgccattacaattatgggaa
actactatggacccaaagacaaggcttttgaagaaaatggtggttgaagatatggcagaa
gcaaatgttaccttttcaagccttatgggtgccagggttgatgcgaggaaggagatgata
aaaaacacagcaaagaagatggatttgaagaatcttgatatttga
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