Lactuca sativa (garden lettuce): 111889534
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Entry
111889534 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111889534
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111889534
Enzymes [BR:
lsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
111889534
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111889534
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
111889534
NCBI-ProteinID:
XP_023741450
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All DBs
Position
2:14323888..14330230
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AA seq
536 aa
AA seq
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MADESVSAPVVNDQDPAIAAADEMKLLGYAVQELPAHAVKDLFAHEVCVRCIFRLFNIHE
GIYALLSPTTIYSIIKKAINSEDMAIKSTEDTVDAKSLQSSPELEVKSSICSVCLGVLQF
SYLDERDTLLGKDHAEDFAMAVAESVKEKGHEIPSFTLEVSLPTLITENEQVILLYLKKK
YASEVWFQEKFSSEHISVKDALKLSMTHPLEKLLGVKSGVSDFRIRLTFEHVDATSAENR
IGKNQGNKRIKSDESNGLVKCSNGTMQSGDASDINSPLKKVGQPCHMTLVCSRAPVFIGG
RYLKFSRNVSQTRWIIDEERKGDASVEELIGGNILPMCNGDSYKFHAAGREDIDVRMLGS
GRPFLVEIQNARFVPSEVSIKEMENKINSLESNLVRVRHLKVVGSQGWSLMREGEAEKQK
QYAALVWISRPISDDDVEAVTSLKELKVLQRTPVRVLHRRSPLDREKTIHWMKIEKIAGS
CQYFLLHLCTQAGTYIKEFVHGDLGRTNPSIGSILGCRAEILQLDVTDVKMDTLTE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaatccgtcagcgcgccggttgttaacgatcaagatcccgcaatagcggcc
gcggacgagatgaagcttcttggatatgccgtgcaagaactacctgctcacgcagtgaaa
gacctgtttgcgcacgaggtgtgtgtccgatgcatttttcggttatttaacattcatgag
ggtatttatgctttgctatcaccaacaaccatatattccattattaaaaaagctataaat
tcagaagatatggcaattaagagcactgaagatactgtagatgcaaagagtttgcagtca
tctccagagttagaagtgaagtcaagtatttgttcagtttgcttaggtgtcttgcaattt
agttatcttgatgagagagatactttgttggggaaggatcatgctgaagactttgccatg
gcagttgctgaaagtgtgaaagagaaaggtcatgaaattcccagttttacccttgaagtc
tcgttgccaacactcattacagaaaatgaacaagtgattctgttgtatttgaagaagaag
tatgcttctgaagtttggtttcaagagaaattctcatctgaacatatttcagtaaaggat
gcactcaagctatctatgacacatccccttgaaaaacttttgggtgttaaatctggtgtt
agtgattttcgtattcgtttgacattcgaacatgttgatgctacatctgctgaaaacagg
atagggaaaaaccaagggaataaaagaataaaatcagatgaaagtaatggacttgttaaa
tgtagcaatggaacaatgcaaagtggtgatgcatctgacattaattccccactgaaaaaa
gttggtcaaccttgtcacatgacattggtttgttctagggcacctgtcttcattggtggt
cgatatctcaagttctcaagaaatgtgagtcaaacccgctggataattgatgaagaaagg
aagggagatgcatctgttgaggagcttattggtggcaatatccttcccatgtgtaatggt
gatagctacaagtttcatgctgctgggagagaggatatagacgtgaggatgttggggtca
ggtaggccatttttggttgagatacaaaatgcccgttttgtcccttctgaagtatccatc
aaggaaatggaaaacaagataaatagtctcgaaagtaacttggttagagtaagacatctg
aaggttgtagggagtcaaggatggagcttaatgcgtgaaggagaagcagaaaaacagaaa
caatatgctgctttggtgtggatatctcgacctattagtgatgatgatgtggaagctgtg
acatccctcaaggaattgaaagttttgcagagaacaccggttagggttcttcataggcga
agtcctttggatcgagaaaagactattcattggatgaaaattgagaaaattgctggaagt
tgtcagtattttctacttcatctatgcactcaagctggaacttatattaaagaatttgtt
catggagatcttggacgtacaaatcctagcattgggtctattctcgggtgtagggctgaa
attctgcaacttgatgtgacagatgtcaaaatggataccttaaccgaatga
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