KEGG   Lactuca sativa (garden lettuce): 111889601
Entry
111889601         CDS       T05352                                 
Symbol
LOC111889601
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03083  Polycomb repressive complex
lsv04120  Ubiquitin mediated proteolysis
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111889601 (LOC111889601)
   04120 Ubiquitin mediated proteolysis
    111889601 (LOC111889601)
  09126 Chromosome
   03083 Polycomb repressive complex
    111889601 (LOC111889601)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111889601 (LOC111889601)
   04121 Ubiquitin system [BR:lsv04121]
    111889601 (LOC111889601)
   03036 Chromosome and associated proteins [BR:lsv03036]
    111889601 (LOC111889601)
Membrane trafficking [BR:lsv04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    111889601 (LOC111889601)
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     111889601 (LOC111889601)
   Cul7 complex
     111889601 (LOC111889601)
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     111889601 (LOC111889601)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     111889601 (LOC111889601)
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 111889601
NCBI-ProteinID: XP_023741514
LinkDB
Position
1:58440148..58440636
AA seq 162 aa
MSPSSSWSRTVVLMSSDGETFEIYEAEAQPLLAIKNLIKPDCNKTCISIADVTRNTLAMI
INYCRMHAEFADNDDLLTSFDRMFLDVDDATLHDLKDAILFLNIRSLIPLINQALANRKI
KANSKEYICDTERFKIKSNISQEEEPEVRCENTWHFDKSKTL
NT seq 489 nt   +upstreamnt  +downstreamnt
atgtcaccgtcatcgtcatggtcaaggacagtcgttttgatgagctccgacggagaaacg
tttgagatttacgaagcagaggcacagccattactagcaataaaaaatttgataaaaccc
gattgcaataaaacctgcatctctatcgccgatgtcaccagaaacaccctcgccatgatc
atcaactactgccggatgcacgccgaattcgccgacaacgatgaccttctaacgtcgttc
gacaggatgttccttgacgtagatgatgcgactctacatgatctgaaagacgccatttta
tttctgaatatccggagcttgattcctttgataaatcaagctctcgctaacaggaaaatc
aaggctaactctaaggaatacatctgcgatactgaaagattcaagatcaagagcaacatc
tcgcaggaggaggaaccggaggtccgctgtgaaaatacatggcattttgataaaagtaaa
accttatag

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