Lactuca sativa (garden lettuce): 111889899
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Entry
111889899 CDS
T05352
Name
(RefSeq) agamous-like MADS-box protein AGL27 isoform X1
KO
K27808
MADS-box protein FLC/MAF
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111889899
Transcription factors [BR:
lsv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
111889899
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
DUF6449
DUF6671
Motif
Other DBs
NCBI-GeneID:
111889899
NCBI-ProteinID:
XP_023741821
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Position
4:3469204..3483976
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AA seq
212 aa
AA seq
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MGRRKLEIKRIEDKSSRLVTFSKRRTGLIKKAQHLSVLCDVDVAVIVFSAAGKLYEFCSS
GTNSNSTVEYILARYEAEGRTMKGDNQDLELPLQCTKFRTCKELLQTVDRLVEENNRDEL
SVIEMTQLEEELAAALMQTRSRKTQLMMEYLSTLQQAEMNLIKEKEEVIEKIASAEHVFG
AGDDGGEGLNDLLVNQMDLPQHQHVTLPLFVT
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggggcggaggaagctcgaaataaagcggatcgaagataagagtagcaggctagtgacg
ttttcgaagcggagaacgggtttaattaagaaagcacaacacctttccgtgctctgcgac
gtcgatgtcgctgtcatcgtattctccgccgccggcaagctgtatgaattctgcagcagc
ggtactaacagtaacagtactgtggagtatattcttgctaggtacgaagcagaaggcagg
accatgaaaggagataaccaagatttagaacttccattgcagtgcacaaaattcagaaca
tgtaaagagcttctacagacagtggacaggcttgttgaagagaataatagggatgagctc
tctgtgattgagatgacacaactagaagaagaacttgctgctgctcttatgcaaacaagg
tcaagaaagacacagttgatgatggagtacctatccaccctccaacaagcggaaatgaat
ttaatcaaagaaaaggaagaagtcatagaaaagattgcatcagcggagcatgtgtttgga
gcaggggatgatgggggtgaaggtctgaacgatcttttagttaaccagatggatttgccc
caacatcaacatgtgactctccctctttttgttacctaa
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