KEGG   Lactuca sativa (garden lettuce): 111889964
Entry
111889964         CDS       T05352                                 
Name
(RefSeq) probable pectate lyase 5
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv00040  Pentose and glucuronate interconversions
lsv01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111889964
Enzymes [BR:lsv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     111889964
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 111889964
NCBI-ProteinID: XP_023741881
LinkDB
Position
5:30238602..30240575
AA seq 401 aa
MAPPSLSLILFFLLSSTAISTSVQPPEHTVQQVQRSLNESRRNLGFLSCGTGNPIDDCWR
CDPNWEKNRQRLADCAIGFGKGAVGGRDGKIYVVTDSSDNDAVNPKPGTLRYAVIQDEPL
WIIFQRDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKPS
GNAMVRSSPRHFGWRTMCDGDGVSIFGGSHVWVDHCSLSNCADGLIDAIMGSTAITLSNN
FMTHHDKVMLLGHSDSYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM
YAIGGSASPTINSQGNRFLAPDRRFSKEVTKHEDAPESKWKNWNWRSEGDLMLNGAFFTP
SGAGASSSYARASSLGARPSSIVSALTTNAGALICRKGSRC
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggcaccaccgtctctctccctcatcctcttcttcctcctctcctccaccgccatttcc
acctccgtacagccgcctgagcatacagtacaacaagtacaaaggagtttgaatgagtct
cggcggaatctcggtttcctgtcatgcgggaccggaaacccaatcgacgattgctggcga
tgcgacccgaattgggagaagaaccgtcaacgactagcggactgcgccattgggttcgga
aaaggagccgtcggcggtagagacggaaagatttacgtcgtcaccgattcaagcgacaac
gacgccgtgaacccaaaaccagggacgttgcgatatgctgtgatccaagacgagccactg
tggatcattttccagcgtgacatggttatcaagctaaaagaagagctaatcatgaacagt
ttcaaaacaatcgacggccgtggcgccagcgttcacatcgccggcggaccctgcattaca
atacaatacgttacgaacataatcatccacggaatcaacatccacgactgtaaaccgagc
gggaacgccatggttcgaagctccccgaggcatttcgggtggagaacgatgtgcgatggt
gatggtgtttcgatatttggaggaagccatgtgtgggtcgaccattgttctttatcaaat
tgcgccgatgggcttattgatgcgatcatggggtccacagctattacgttatcaaacaat
ttcatgactcaccatgacaaagtgatgcttttaggtcacagtgactcatatgagcaagac
aagaacatgcaagtcaccattgcctttaaccactttggtgaaggtttagttcaaaggatg
cccagatgtcgtcatggatattttcatgtggtgaataacgactacacccattgggagatg
tatgcgattggagggagtgcatcccctaccatcaatagccaagggaatagatttcttgca
cccgatagaagatttagcaaagaggtcacgaaacatgaggatgcaccggagagcaaatgg
aaaaactggaattggaggtcggaaggggatttgatgttgaatggtgcgtttttcacacca
tcgggtgctggggcatcatctagctacgcaagggcttcaagtcttggggctagaccttca
tcgatcgtgtctgcactcacgactaatgcaggagctcttatttgtaggaagggctctcgt
tgttga

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