Lactuca sativa (garden lettuce): 111890198
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Entry
111890198 CDS
T05352
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00906
Carotenoid biosynthesis
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
Module
lsv_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
111890198
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lsv01006
]
111890198
Enzymes [BR:
lsv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
111890198
Prenyltransferases [BR:
lsv01006
]
Terpene biosynthesis
Squalene/phytoene synthase
111890198
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
111890198
NCBI-ProteinID:
XP_023742119
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All DBs
Position
6:complement(76842529..76844371)
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AA seq
371 aa
AA seq
DB search
MSSAVCTVGSVINNARNLNREFTITARVVAPKRPTLPELSLKGIPHTDLHVREIVQRQLY
TRHSDHNLCRKPEFNPEFLEDAYDRCRDICAEYAKTFYLGTRLMTEERQKAVWAIYVWCR
RTDELVDGPNATHMSATVLDRWEERLEDLFNGRPFDMLDAALTDTVQKFPLDIKPFRDMI
EGMRMDTKKSRYENYQELYLYCYYVAGTVALMTVPVMGISPESSSHASSIYNSALSLGIG
NQLTNILRDVGEDALRGRVYLPQDELAQYGLCDDDVYSRRVTDNWREFMKGQINRARFYF
NQAEEGASKLDKDSRWPVWSSLLLYRTILDAIEENDYDNLTKRAYVGRTKKLLMLPLSYT
RSVSMPGFAFH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgcggtttgcactgtaggatcagttatcaacaatgcccgaaacttgaatcga
gagttcacgataacagctagggttgtagcaccgaagagaccaactttgcctgaattatcg
ttgaaaggcattcctcacactgatcttcatgtccgagagatcgttcaaagacagttgtac
acacgacacagcgatcataatctttgcagaaaacccgagttcaatcctgagtttcttgaa
gatgcctatgatcggtgtagagatatatgtgctgaatatgccaagactttctatctagga
accagacttatgactgaagaaagacagaaagcagtatgggctatatatgtttggtgcagg
agaacagatgaactcgttgatggccctaacgccacacacatgagtgctactgttcttgac
agatgggaagagagacttgaagatctctttaatggccgaccctttgacatgcttgatgct
gccctcacagacaccgttcaaaagttcccactagacatcaagccgttcagagatatgatc
gagggaatgaggatggacaccaagaaaagtcgctatgaaaattatcaagaactttaccta
tattgctactatgttgctggaacagttgctctgatgactgttcctgtcatgggtatctct
ccggaatcatcatcacatgcatcaagcatctataattctgctctcagtcttggcatcgga
aatcagctcacgaatatccttagagatgtaggagaagatgcattaagaggtagagtgtat
cttcctcaagatgagctagcccaatatgggctatgtgatgacgatgtttactcaagaaga
gtgactgataactggagagaattcatgaaagggcagattaatcgggctaggttttacttc
aaccaagccgaagaaggagcttccaagcttgacaaagatagccgatggccggtgtggtca
tcgttgttgttgtatcgaactatcttggatgctattgaggagaatgattatgataacttg
acaaaaagagcttatgtcggtaggactaagaaacttctcatgttacctttatcgtacaca
agatctgtatcaatgcccggcttcgccttccattag
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